Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr2bQ8CFI7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.68■□□□□ 0.42
Polr2bQ8CFI7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.68■□□□□ 0.42
Polr2bQ8CFI7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr2bQ8CFI7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr2bQ8CFI7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Polr2bQ8CFI7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.68■□□□□ 0.42
Polr2bQ8CFI7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.68■□□□□ 0.42
Polr2bQ8CFI7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr2bQ8CFI7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Polr2bQ8CFI7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.67■□□□□ 0.42
Polr2bQ8CFI7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Polr2bQ8CFI7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Polr2bQ8CFI7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Polr2bQ8CFI7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Polr2bQ8CFI7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Polr2bQ8CFI7 Gm45328-201ENSMUST00000210942 917 ntBASIC17.65■□□□□ 0.42
Polr2bQ8CFI7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Polr2bQ8CFI7 Gm10819-201ENSMUST00000099988 561 ntBASIC17.65■□□□□ 0.42
Polr2bQ8CFI7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Polr2bQ8CFI7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Polr2bQ8CFI7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Polr2bQ8CFI7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Polr2bQ8CFI7 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.65■□□□□ 0.42
Polr2bQ8CFI7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Polr2bQ8CFI7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Polr2bQ8CFI7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Polr2bQ8CFI7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Polr2bQ8CFI7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Polr2bQ8CFI7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Polr2bQ8CFI7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Polr2bQ8CFI7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Polr2bQ8CFI7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Gm13216-201ENSMUST00000117145 591 ntBASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2bQ8CFI7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2bQ8CFI7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2bQ8CFI7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2bQ8CFI7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2bQ8CFI7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.63■□□□□ 0.41
Polr2bQ8CFI7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2bQ8CFI7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2bQ8CFI7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2bQ8CFI7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.63■□□□□ 0.41
Polr2bQ8CFI7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Polr2bQ8CFI7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms