Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Gm14859-201ENSMUST00000117752 357 ntBASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Gm27000-201ENSMUST00000182943 842 ntBASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Gm10819-201ENSMUST00000099988 561 ntBASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc178Q8CDV0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc178Q8CDV0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc178Q8CDV0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc178Q8CDV0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc178Q8CDV0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ccdc178Q8CDV0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc178Q8CDV0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc178Q8CDV0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc178Q8CDV0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc178Q8CDV0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc178Q8CDV0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Ccdc178Q8CDV0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.52■□□□□ 0.72
Ccdc178Q8CDV0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc178Q8CDV0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc178Q8CDV0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Ccdc178Q8CDV0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc178Q8CDV0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc178Q8CDV0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc178Q8CDV0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc178Q8CDV0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc178Q8CDV0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc178Q8CDV0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc178Q8CDV0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc178Q8CDV0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccdc178Q8CDV0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc178Q8CDV0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc178Q8CDV0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Ccdc178Q8CDV0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc178Q8CDV0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc178Q8CDV0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccdc178Q8CDV0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc178Q8CDV0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc178Q8CDV0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc178Q8CDV0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc178Q8CDV0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc178Q8CDV0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc178Q8CDV0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Ccdc178Q8CDV0 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.5■□□□□ 0.71
Ccdc178Q8CDV0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.5■□□□□ 0.71
Ccdc178Q8CDV0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.5■□□□□ 0.71
Ccdc178Q8CDV0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc178Q8CDV0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ccdc178Q8CDV0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc178Q8CDV0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc178Q8CDV0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Ccdc178Q8CDV0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc178Q8CDV0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc178Q8CDV0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc178Q8CDV0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc178Q8CDV0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc178Q8CDV0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc178Q8CDV0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc178Q8CDV0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc178Q8CDV0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.49■□□□□ 0.71
Ccdc178Q8CDV0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc178Q8CDV0 Gm7284-201ENSMUST00000131667 944 ntBASIC19.49■□□□□ 0.71
Ccdc178Q8CDV0 Gm29518-201ENSMUST00000190858 372 ntBASIC19.49■□□□□ 0.71
Ccdc178Q8CDV0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc178Q8CDV0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc178Q8CDV0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc178Q8CDV0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms