Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Gm18101-201ENSMUST00000215769 548 ntBASIC16.99■□□□□ 0.31
Trub1Q8C0D0 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trub1Q8C0D0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.98■□□□□ 0.31
Trub1Q8C0D0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Gm37722-201ENSMUST00000193757 208 ntBASIC16.97■□□□□ 0.31
Trub1Q8C0D0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trub1Q8C0D0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trub1Q8C0D0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Gm10231-201ENSMUST00000181584 441 ntBASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Gm10175-202ENSMUST00000208752 441 ntBASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trub1Q8C0D0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trub1Q8C0D0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms