Protein–RNA interactions for Protein: Q8BVL3

Snx17, Sorting nexin-17, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx17Q8BVL3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Snx17Q8BVL3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx17Q8BVL3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Snx17Q8BVL3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx17Q8BVL3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx17Q8BVL3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Snx17Q8BVL3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Gm8969-201ENSMUST00000199694 526 ntBASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx17Q8BVL3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx17Q8BVL3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx17Q8BVL3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx17Q8BVL3 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.23■□□□□ 0.51
Snx17Q8BVL3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx17Q8BVL3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Snx17Q8BVL3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Snx17Q8BVL3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx17Q8BVL3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Snx17Q8BVL3 Gm8097-201ENSMUST00000117903 829 ntBASIC18.23■□□□□ 0.51
Snx17Q8BVL3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Snx17Q8BVL3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.23■□□□□ 0.51
Snx17Q8BVL3 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.23■□□□□ 0.51
Snx17Q8BVL3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx17Q8BVL3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx17Q8BVL3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx17Q8BVL3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx17Q8BVL3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.23■□□□□ 0.51
Snx17Q8BVL3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Snx17Q8BVL3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx17Q8BVL3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.22■□□□□ 0.51
Snx17Q8BVL3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx17Q8BVL3 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.22■□□□□ 0.51
Snx17Q8BVL3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx17Q8BVL3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx17Q8BVL3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Snx17Q8BVL3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Snx17Q8BVL3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.22■□□□□ 0.51
Snx17Q8BVL3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Snx17Q8BVL3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx17Q8BVL3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx17Q8BVL3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Snx17Q8BVL3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx17Q8BVL3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx17Q8BVL3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx17Q8BVL3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx17Q8BVL3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Snx17Q8BVL3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx17Q8BVL3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx17Q8BVL3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Snx17Q8BVL3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx17Q8BVL3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx17Q8BVL3 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.21■□□□□ 0.51
Snx17Q8BVL3 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.21■□□□□ 0.51
Snx17Q8BVL3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx17Q8BVL3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx17Q8BVL3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
Snx17Q8BVL3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Snx17Q8BVL3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snx17Q8BVL3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snx17Q8BVL3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snx17Q8BVL3 Gm7222-201ENSMUST00000117512 906 ntBASIC18.2■□□□□ 0.5
Snx17Q8BVL3 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.2■□□□□ 0.5
Snx17Q8BVL3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Snx17Q8BVL3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Snx17Q8BVL3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snx17Q8BVL3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Snx17Q8BVL3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.2■□□□□ 0.5
Snx17Q8BVL3 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.2■□□□□ 0.5
Snx17Q8BVL3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snx17Q8BVL3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snx17Q8BVL3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Snx17Q8BVL3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snx17Q8BVL3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Snx17Q8BVL3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snx17Q8BVL3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snx17Q8BVL3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snx17Q8BVL3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Snx17Q8BVL3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snx17Q8BVL3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snx17Q8BVL3 Gm4459-201ENSMUST00000118750 468 ntBASIC18.19■□□□□ 0.5
Snx17Q8BVL3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.19■□□□□ 0.5
Snx17Q8BVL3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Snx17Q8BVL3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.19■□□□□ 0.5
Snx17Q8BVL3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms