Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp43Q8BUM9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Mir7071-201ENSMUST00000184847 69 ntBASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp43Q8BUM9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Gm36967-201ENSMUST00000193814 266 ntBASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.65■□□□□ 0.26
Usp43Q8BUM9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Usp43Q8BUM9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Usp43Q8BUM9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Usp43Q8BUM9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms