Protein–RNA interactions for Protein: Q8BFU8

Slc17a8, Vesicular glutamate transporter 3, mousemouse

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc17a8Q8BFU8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc17a8Q8BFU8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.21■□□□□ 0.51
Slc17a8Q8BFU8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc17a8Q8BFU8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Slc17a8Q8BFU8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.21■□□□□ 0.5
Slc17a8Q8BFU8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Slc17a8Q8BFU8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc17a8Q8BFU8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc17a8Q8BFU8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Slc17a8Q8BFU8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc17a8Q8BFU8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Slc17a8Q8BFU8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc17a8Q8BFU8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc17a8Q8BFU8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc17a8Q8BFU8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc17a8Q8BFU8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc17a8Q8BFU8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc17a8Q8BFU8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc17a8Q8BFU8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc17a8Q8BFU8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 Haglr-201ENSMUST00000100000 2085 ntBASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 Gm27357-201ENSMUST00000183754 135 ntBASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc17a8Q8BFU8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc17a8Q8BFU8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc17a8Q8BFU8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc17a8Q8BFU8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc17a8Q8BFU8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc17a8Q8BFU8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.16■□□□□ 0.5
Slc17a8Q8BFU8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc17a8Q8BFU8 Gm13312-201ENSMUST00000119631 718 ntBASIC18.16■□□□□ 0.5
Slc17a8Q8BFU8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc17a8Q8BFU8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc17a8Q8BFU8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.16■□□□□ 0.5
Slc17a8Q8BFU8 Gm21362-201ENSMUST00000194272 928 ntBASIC18.16■□□□□ 0.5
Slc17a8Q8BFU8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc17a8Q8BFU8 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.16■□□□□ 0.5
Slc17a8Q8BFU8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc17a8Q8BFU8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Slc17a8Q8BFU8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms