Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Gm13418-201ENSMUST00000119097 944 ntBASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Gm7230-201ENSMUST00000173026 815 ntBASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Gm4535-201ENSMUST00000182274 558 ntBASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Gm10355-201ENSMUST00000097146 517 ntBASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp6nlQ80XC3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.12■□□□□ 0.49
Usp6nlQ80XC3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Usp6nlQ80XC3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp6nlQ80XC3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.11■□□□□ 0.49
Usp6nlQ80XC3 Gm11779-201ENSMUST00000118541 368 ntBASIC18.11■□□□□ 0.49
Usp6nlQ80XC3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp6nlQ80XC3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp6nlQ80XC3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.11■□□□□ 0.49
Usp6nlQ80XC3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp6nlQ80XC3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp6nlQ80XC3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp6nlQ80XC3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp6nlQ80XC3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.11■□□□□ 0.49
Usp6nlQ80XC3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Usp6nlQ80XC3 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.11■□□□□ 0.49
Usp6nlQ80XC3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
Usp6nlQ80XC3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Usp6nlQ80XC3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp6nlQ80XC3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp6nlQ80XC3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp6nlQ80XC3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp6nlQ80XC3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp6nlQ80XC3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp6nlQ80XC3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp6nlQ80XC3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp6nlQ80XC3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.09■□□□□ 0.49
Usp6nlQ80XC3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp6nlQ80XC3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.09■□□□□ 0.49
Usp6nlQ80XC3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.09■□□□□ 0.49
Usp6nlQ80XC3 Psmb5-202ENSMUST00000227257 622 ntBASIC18.09■□□□□ 0.49
Usp6nlQ80XC3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms