Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC25.42■■□□□ 1.66
Rpap1Q80TE0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Rpap1Q80TE0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC25.42■■□□□ 1.66
Rpap1Q80TE0 Mir8117-201ENSMUST00000184773 107 ntBASIC25.42■■□□□ 1.66
Rpap1Q80TE0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC25.42■■□□□ 1.66
Rpap1Q80TE0 AC174742.1-201ENSMUST00000218272 304 ntBASIC25.42■■□□□ 1.66
Rpap1Q80TE0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rpap1Q80TE0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rpap1Q80TE0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rpap1Q80TE0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rpap1Q80TE0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rpap1Q80TE0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rpap1Q80TE0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
Rpap1Q80TE0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rpap1Q80TE0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rpap1Q80TE0 Gm45606-201ENSMUST00000209836 2795 ntBASIC25.41■■□□□ 1.66
Rpap1Q80TE0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rpap1Q80TE0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Rpap1Q80TE0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC25.4■■□□□ 1.66
Rpap1Q80TE0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rpap1Q80TE0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rpap1Q80TE0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC25.4■■□□□ 1.66
Rpap1Q80TE0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rpap1Q80TE0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC25.4■■□□□ 1.66
Rpap1Q80TE0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rpap1Q80TE0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rpap1Q80TE0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rpap1Q80TE0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rpap1Q80TE0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rpap1Q80TE0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rpap1Q80TE0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rpap1Q80TE0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rpap1Q80TE0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
Rpap1Q80TE0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rpap1Q80TE0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC25.39■■□□□ 1.66
Rpap1Q80TE0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC25.39■■□□□ 1.66
Rpap1Q80TE0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Rpap1Q80TE0 Gm44945-201ENSMUST00000206764 1187 ntBASIC25.39■■□□□ 1.66
Rpap1Q80TE0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Rpap1Q80TE0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Rpap1Q80TE0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Rpap1Q80TE0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Rpap1Q80TE0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Rpap1Q80TE0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.65
Rpap1Q80TE0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rpap1Q80TE0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rpap1Q80TE0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Rpap1Q80TE0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rpap1Q80TE0 Gm7229-201ENSMUST00000214719 1007 ntBASIC25.38■■□□□ 1.65
Rpap1Q80TE0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rpap1Q80TE0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC25.38■■□□□ 1.65
Rpap1Q80TE0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rpap1Q80TE0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rpap1Q80TE0 Gm11873-201ENSMUST00000117877 1304 ntBASIC25.38■■□□□ 1.65
Rpap1Q80TE0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rpap1Q80TE0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rpap1Q80TE0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rpap1Q80TE0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rpap1Q80TE0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rpap1Q80TE0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Rpap1Q80TE0 Gm15500-202ENSMUST00000071641 1019 ntBASIC25.37■■□□□ 1.65
Rpap1Q80TE0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Rpap1Q80TE0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rpap1Q80TE0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rpap1Q80TE0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Rpap1Q80TE0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rpap1Q80TE0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Rpap1Q80TE0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rpap1Q80TE0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Rpap1Q80TE0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rpap1Q80TE0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Rpap1Q80TE0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Rpap1Q80TE0 Gm15743-202ENSMUST00000182690 1901 ntBASIC25.36■■□□□ 1.65
Rpap1Q80TE0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rpap1Q80TE0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rpap1Q80TE0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC25.36■■□□□ 1.65
Rpap1Q80TE0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC25.36■■□□□ 1.65
Rpap1Q80TE0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Rpap1Q80TE0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC25.36■■□□□ 1.65
Rpap1Q80TE0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC25.36■■□□□ 1.65
Rpap1Q80TE0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC25.36■■□□□ 1.65
Rpap1Q80TE0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Rpap1Q80TE0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rpap1Q80TE0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Rpap1Q80TE0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
Rpap1Q80TE0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Rpap1Q80TE0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
Rpap1Q80TE0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Rpap1Q80TE0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rpap1Q80TE0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Rpap1Q80TE0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rpap1Q80TE0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC25.35■■□□□ 1.65
Rpap1Q80TE0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rpap1Q80TE0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rpap1Q80TE0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Rpap1Q80TE0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Rpap1Q80TE0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC25.34■■□□□ 1.65
Rpap1Q80TE0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rpap1Q80TE0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rpap1Q80TE0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms