Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ShprhQ7TPQ3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
ShprhQ7TPQ3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
ShprhQ7TPQ3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ShprhQ7TPQ3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
ShprhQ7TPQ3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC23.21■■□□□ 1.31
ShprhQ7TPQ3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
ShprhQ7TPQ3 Gm27300-201ENSMUST00000184085 97 ntBASIC23.21■■□□□ 1.31
ShprhQ7TPQ3 Gm27335-201ENSMUST00000184758 97 ntBASIC23.21■■□□□ 1.31
ShprhQ7TPQ3 AC147366.1-201ENSMUST00000227671 852 ntBASIC23.21■■□□□ 1.31
ShprhQ7TPQ3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ShprhQ7TPQ3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC23.21■■□□□ 1.31
ShprhQ7TPQ3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ShprhQ7TPQ3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ShprhQ7TPQ3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ShprhQ7TPQ3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ShprhQ7TPQ3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ShprhQ7TPQ3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
ShprhQ7TPQ3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC23.2■■□□□ 1.3
ShprhQ7TPQ3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
ShprhQ7TPQ3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC23.2■■□□□ 1.3
ShprhQ7TPQ3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ShprhQ7TPQ3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ShprhQ7TPQ3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ShprhQ7TPQ3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ShprhQ7TPQ3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Gm5253-201ENSMUST00000187104 1025 ntBASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 AC174742.1-201ENSMUST00000218272 304 ntBASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 AC124549.3-201ENSMUST00000225541 367 ntBASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ShprhQ7TPQ3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ShprhQ7TPQ3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ShprhQ7TPQ3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ShprhQ7TPQ3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ShprhQ7TPQ3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ShprhQ7TPQ3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ShprhQ7TPQ3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ShprhQ7TPQ3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC23.18■■□□□ 1.3
ShprhQ7TPQ3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC23.18■■□□□ 1.3
ShprhQ7TPQ3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC23.18■■□□□ 1.3
ShprhQ7TPQ3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC23.18■■□□□ 1.3
ShprhQ7TPQ3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
ShprhQ7TPQ3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ShprhQ7TPQ3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ShprhQ7TPQ3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC23.18■■□□□ 1.3
ShprhQ7TPQ3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
ShprhQ7TPQ3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC23.17■■□□□ 1.3
ShprhQ7TPQ3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
ShprhQ7TPQ3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ShprhQ7TPQ3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ShprhQ7TPQ3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ShprhQ7TPQ3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC23.17■■□□□ 1.3
ShprhQ7TPQ3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC23.17■■□□□ 1.3
ShprhQ7TPQ3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ShprhQ7TPQ3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ShprhQ7TPQ3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ShprhQ7TPQ3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ShprhQ7TPQ3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ShprhQ7TPQ3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ShprhQ7TPQ3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ShprhQ7TPQ3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 Gm8344-201ENSMUST00000119813 856 ntBASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 Gm15500-202ENSMUST00000071641 1019 ntBASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ShprhQ7TPQ3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms