Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Nup98Q6PFD9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup98Q6PFD9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup98Q6PFD9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.31■□□□□ 0.68
Nup98Q6PFD9 Gm14140-201ENSMUST00000119999 995 ntBASIC19.31■□□□□ 0.68
Nup98Q6PFD9 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.31■□□□□ 0.68
Nup98Q6PFD9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Nup98Q6PFD9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.31■□□□□ 0.68
Nup98Q6PFD9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nup98Q6PFD9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.31■□□□□ 0.68
Nup98Q6PFD9 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.31■□□□□ 0.68
Nup98Q6PFD9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup98Q6PFD9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup98Q6PFD9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup98Q6PFD9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nup98Q6PFD9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nup98Q6PFD9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup98Q6PFD9 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.3■□□□□ 0.68
Nup98Q6PFD9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup98Q6PFD9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup98Q6PFD9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup98Q6PFD9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Nup98Q6PFD9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.3■□□□□ 0.68
Nup98Q6PFD9 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.3■□□□□ 0.68
Nup98Q6PFD9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.3■□□□□ 0.68
Nup98Q6PFD9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.3■□□□□ 0.68
Nup98Q6PFD9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.3■□□□□ 0.68
Nup98Q6PFD9 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.3■□□□□ 0.68
Nup98Q6PFD9 Gm15590-201ENSMUST00000078419 552 ntBASIC19.3■□□□□ 0.68
Nup98Q6PFD9 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.29■□□□□ 0.68
Nup98Q6PFD9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup98Q6PFD9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.29■□□□□ 0.68
Nup98Q6PFD9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nup98Q6PFD9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.29■□□□□ 0.68
Nup98Q6PFD9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.29■□□□□ 0.68
Nup98Q6PFD9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup98Q6PFD9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup98Q6PFD9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup98Q6PFD9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup98Q6PFD9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup98Q6PFD9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup98Q6PFD9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nup98Q6PFD9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup98Q6PFD9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nup98Q6PFD9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup98Q6PFD9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup98Q6PFD9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup98Q6PFD9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup98Q6PFD9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup98Q6PFD9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup98Q6PFD9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup98Q6PFD9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.27■□□□□ 0.68
Nup98Q6PFD9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup98Q6PFD9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup98Q6PFD9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nup98Q6PFD9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.27■□□□□ 0.68
Nup98Q6PFD9 Gm8655-201ENSMUST00000221159 852 ntBASIC19.27■□□□□ 0.68
Nup98Q6PFD9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.27■□□□□ 0.67
Nup98Q6PFD9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nup98Q6PFD9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nup98Q6PFD9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nup98Q6PFD9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nup98Q6PFD9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nup98Q6PFD9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.27■□□□□ 0.67
Nup98Q6PFD9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nup98Q6PFD9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nup98Q6PFD9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms