Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.61■□□□□ 0.41
CtifQ6PEE2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CtifQ6PEE2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CtifQ6PEE2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CtifQ6PEE2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CtifQ6PEE2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CtifQ6PEE2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CtifQ6PEE2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CtifQ6PEE2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CtifQ6PEE2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CtifQ6PEE2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CtifQ6PEE2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CtifQ6PEE2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CtifQ6PEE2 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.6■□□□□ 0.41
CtifQ6PEE2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CtifQ6PEE2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CtifQ6PEE2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CtifQ6PEE2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CtifQ6PEE2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CtifQ6PEE2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CtifQ6PEE2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CtifQ6PEE2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CtifQ6PEE2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.6■□□□□ 0.41
CtifQ6PEE2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CtifQ6PEE2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CtifQ6PEE2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CtifQ6PEE2 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.6■□□□□ 0.41
CtifQ6PEE2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CtifQ6PEE2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CtifQ6PEE2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CtifQ6PEE2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.59■□□□□ 0.41
CtifQ6PEE2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CtifQ6PEE2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CtifQ6PEE2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CtifQ6PEE2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CtifQ6PEE2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CtifQ6PEE2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CtifQ6PEE2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CtifQ6PEE2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CtifQ6PEE2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CtifQ6PEE2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CtifQ6PEE2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CtifQ6PEE2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
CtifQ6PEE2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CtifQ6PEE2 Gm42778-201ENSMUST00000199644 553 ntBASIC17.58■□□□□ 0.4
CtifQ6PEE2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CtifQ6PEE2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CtifQ6PEE2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CtifQ6PEE2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.58■□□□□ 0.4
CtifQ6PEE2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CtifQ6PEE2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CtifQ6PEE2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.58■□□□□ 0.4
CtifQ6PEE2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CtifQ6PEE2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CtifQ6PEE2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CtifQ6PEE2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CtifQ6PEE2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Gm26571-201ENSMUST00000181399 666 ntBASIC17.57■□□□□ 0.4
CtifQ6PEE2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CtifQ6PEE2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms