Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.65■□□□□ 0.1
Rnf220Q6PDX6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf220Q6PDX6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Gm42569-201ENSMUST00000200539 472 ntBASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Rnf220Q6PDX6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Gm26524-201ENSMUST00000192339 390 ntBASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Gm44549-201ENSMUST00000208351 577 ntBASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf220Q6PDX6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf220Q6PDX6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms