Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Six2Q62232 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six2Q62232 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six2Q62232 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six2Q62232 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Six2Q62232 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six2Q62232 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Six2Q62232 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Six2Q62232 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Six2Q62232 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Six2Q62232 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six2Q62232 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six2Q62232 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six2Q62232 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six2Q62232 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six2Q62232 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.55■□□□□ 0.4
Six2Q62232 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six2Q62232 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Six2Q62232 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six2Q62232 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Six2Q62232 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Six2Q62232 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.55■□□□□ 0.4
Six2Q62232 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Six2Q62232 Gm22697-201ENSMUST00000175194 63 ntBASIC17.54■□□□□ 0.4
Six2Q62232 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Six2Q62232 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.54■□□□□ 0.4
Six2Q62232 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Gm9987-201ENSMUST00000069768 567 ntBASIC17.54■□□□□ 0.4
Six2Q62232 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.54■□□□□ 0.4
Six2Q62232 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Six2Q62232 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Six2Q62232 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.53■□□□□ 0.4
Six2Q62232 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Six2Q62232 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.52■□□□□ 0.4
Six2Q62232 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six2Q62232 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Six2Q62232 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six2Q62232 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Six2Q62232 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Six2Q62232 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six2Q62232 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Six2Q62232 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.52■□□□□ 0.4
Six2Q62232 Gm27389-201ENSMUST00000183622 195 ntBASIC17.52■□□□□ 0.4
Six2Q62232 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Six2Q62232 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six2Q62232 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six2Q62232 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six2Q62232 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Six2Q62232 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Six2Q62232 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Six2Q62232 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Six2Q62232 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Six2Q62232 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Six2Q62232 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Six2Q62232 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Six2Q62232 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Six2Q62232 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Six2Q62232 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.51■□□□□ 0.39
Six2Q62232 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms