Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.7■□□□□ 0.26
Sdf4Q61112 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Sdf4Q61112 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
Sdf4Q61112 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sdf4Q61112 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Sdf4Q61112 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Sdf4Q61112 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.7■□□□□ 0.26
Sdf4Q61112 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sdf4Q61112 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sdf4Q61112 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdf4Q61112 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdf4Q61112 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdf4Q61112 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sdf4Q61112 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdf4Q61112 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdf4Q61112 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdf4Q61112 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sdf4Q61112 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sdf4Q61112 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.69■□□□□ 0.26
Sdf4Q61112 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Sdf4Q61112 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdf4Q61112 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdf4Q61112 Gm37722-201ENSMUST00000193757 208 ntBASIC16.69■□□□□ 0.26
Sdf4Q61112 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdf4Q61112 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdf4Q61112 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sdf4Q61112 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sdf4Q61112 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sdf4Q61112 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sdf4Q61112 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sdf4Q61112 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sdf4Q61112 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdf4Q61112 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdf4Q61112 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.69■□□□□ 0.26
Sdf4Q61112 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sdf4Q61112 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdf4Q61112 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sdf4Q61112 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdf4Q61112 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdf4Q61112 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdf4Q61112 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sdf4Q61112 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdf4Q61112 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.68■□□□□ 0.26
Sdf4Q61112 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdf4Q61112 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.68■□□□□ 0.26
Sdf4Q61112 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sdf4Q61112 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Sdf4Q61112 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sdf4Q61112 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sdf4Q61112 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdf4Q61112 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sdf4Q61112 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.68■□□□□ 0.26
Sdf4Q61112 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sdf4Q61112 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdf4Q61112 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdf4Q61112 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Sdf4Q61112 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdf4Q61112 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdf4Q61112 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdf4Q61112 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdf4Q61112 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdf4Q61112 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdf4Q61112 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdf4Q61112 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdf4Q61112 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdf4Q61112 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sdf4Q61112 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdf4Q61112 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdf4Q61112 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdf4Q61112 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdf4Q61112 Haglr-201ENSMUST00000100000 2085 ntBASIC16.66■□□□□ 0.26
Sdf4Q61112 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdf4Q61112 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdf4Q61112 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdf4Q61112 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sdf4Q61112 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdf4Q61112 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdf4Q61112 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdf4Q61112 Gm9013-201ENSMUST00000132939 882 ntBASIC16.66■□□□□ 0.26
Sdf4Q61112 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.66■□□□□ 0.26
Sdf4Q61112 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.66■□□□□ 0.26
Sdf4Q61112 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdf4Q61112 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sdf4Q61112 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdf4Q61112 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Sdf4Q61112 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdf4Q61112 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdf4Q61112 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdf4Q61112 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms