Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.82■□□□□ 0.28
Slc6a4Q60857 Birc2-201ENSMUST00000054878 378 ntBASIC16.82■□□□□ 0.28
Slc6a4Q60857 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.81■□□□□ 0.28
Slc6a4Q60857 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a4Q60857 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Gm15372-201ENSMUST00000120729 834 ntBASIC16.8■□□□□ 0.28
Slc6a4Q60857 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Rprl3-201ENSMUST00000157400 290 ntBASIC16.8■□□□□ 0.28
Slc6a4Q60857 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.8■□□□□ 0.28
Slc6a4Q60857 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc6a4Q60857 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.79■□□□□ 0.28
Slc6a4Q60857 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Gm36967-201ENSMUST00000193814 266 ntBASIC16.79■□□□□ 0.28
Slc6a4Q60857 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Gm7461-201ENSMUST00000058918 827 ntBASIC16.79■□□□□ 0.28
Slc6a4Q60857 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a4Q60857 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Slc6a4Q60857 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc6a4Q60857 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc6a4Q60857 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms