Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom1Q5SX79 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom1Q5SX79 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom1Q5SX79 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom1Q5SX79 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom1Q5SX79 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom1Q5SX79 Gm44771-201ENSMUST00000206975 626 ntBASIC17.48■□□□□ 0.39
Shroom1Q5SX79 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.48■□□□□ 0.39
Shroom1Q5SX79 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.48■□□□□ 0.39
Shroom1Q5SX79 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom1Q5SX79 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Shroom1Q5SX79 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom1Q5SX79 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom1Q5SX79 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom1Q5SX79 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shroom1Q5SX79 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Gm28659-201ENSMUST00000188013 759 ntBASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shroom1Q5SX79 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Mzt1-203ENSMUST00000227948 952 ntBASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shroom1Q5SX79 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Shroom1Q5SX79 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Shroom1Q5SX79 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Shroom1Q5SX79 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.46■□□□□ 0.38
Shroom1Q5SX79 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Shroom1Q5SX79 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.45■□□□□ 0.38
Shroom1Q5SX79 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom1Q5SX79 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom1Q5SX79 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom1Q5SX79 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom1Q5SX79 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Shroom1Q5SX79 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom1Q5SX79 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom1Q5SX79 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom1Q5SX79 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom1Q5SX79 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shroom1Q5SX79 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.45■□□□□ 0.38
Shroom1Q5SX79 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Gm13216-201ENSMUST00000117145 591 ntBASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.44■□□□□ 0.38
Shroom1Q5SX79 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms