Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ctc1Q5SUQ9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ctc1Q5SUQ9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctc1Q5SUQ9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctc1Q5SUQ9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctc1Q5SUQ9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctc1Q5SUQ9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctc1Q5SUQ9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ctc1Q5SUQ9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctc1Q5SUQ9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ctc1Q5SUQ9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctc1Q5SUQ9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctc1Q5SUQ9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctc1Q5SUQ9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctc1Q5SUQ9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.41■□□□□ 0.38
Ctc1Q5SUQ9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ctc1Q5SUQ9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Gm7461-201ENSMUST00000058918 827 ntBASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ctc1Q5SUQ9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ctc1Q5SUQ9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctc1Q5SUQ9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Ctc1Q5SUQ9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctc1Q5SUQ9 Gm11950-201ENSMUST00000121615 838 ntBASIC17.39■□□□□ 0.37
Ctc1Q5SUQ9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctc1Q5SUQ9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Ctc1Q5SUQ9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ctc1Q5SUQ9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ctc1Q5SUQ9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctc1Q5SUQ9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctc1Q5SUQ9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctc1Q5SUQ9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctc1Q5SUQ9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Ctc1Q5SUQ9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctc1Q5SUQ9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.39■□□□□ 0.37
Ctc1Q5SUQ9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Gm13186-201ENSMUST00000118031 316 ntBASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctc1Q5SUQ9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctc1Q5SUQ9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctc1Q5SUQ9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ctc1Q5SUQ9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms