Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Mir6349-201ENSMUST00000184059 97 ntBASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8d-1Q5R1H8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8d-1Q5R1H8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8d-1Q5R1H8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8d-1Q5R1H8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8d-1Q5R1H8 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.52□□□□□ -0.24
Trav8d-1Q5R1H8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.52□□□□□ -0.24
Trav8d-1Q5R1H8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8d-1Q5R1H8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8d-1Q5R1H8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8d-1Q5R1H8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8d-1Q5R1H8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8d-1Q5R1H8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8d-1Q5R1H8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8d-1Q5R1H8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8d-1Q5R1H8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav8d-1Q5R1H8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8d-1Q5R1H8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8d-1Q5R1H8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8d-1Q5R1H8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8d-1Q5R1H8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8d-1Q5R1H8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.52□□□□□ -0.25
Trav8d-1Q5R1H8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8d-1Q5R1H8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav8d-1Q5R1H8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8d-1Q5R1H8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav8d-1Q5R1H8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Gm10418-201ENSMUST00000100943 576 ntBASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Gm15375-201ENSMUST00000119510 849 ntBASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav8d-1Q5R1H8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms