Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf43Q5NCP0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf43Q5NCP0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf43Q5NCP0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf43Q5NCP0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf43Q5NCP0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.73■□□□□ 0.27
Rnf43Q5NCP0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf43Q5NCP0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf43Q5NCP0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf43Q5NCP0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.73■□□□□ 0.27
Rnf43Q5NCP0 Gm8000-201ENSMUST00000188378 592 ntBASIC16.73■□□□□ 0.27
Rnf43Q5NCP0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf43Q5NCP0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf43Q5NCP0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf43Q5NCP0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rnf43Q5NCP0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf43Q5NCP0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf43Q5NCP0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf43Q5NCP0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Mir5126-201ENSMUST00000175513 77 ntBASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf43Q5NCP0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.71■□□□□ 0.26
Rnf43Q5NCP0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf43Q5NCP0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms