Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shank3Q4ACU6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shank3Q4ACU6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shank3Q4ACU6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Shank3Q4ACU6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shank3Q4ACU6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shank3Q4ACU6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shank3Q4ACU6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shank3Q4ACU6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shank3Q4ACU6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.4■□□□□ 0.86
Shank3Q4ACU6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shank3Q4ACU6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.4■□□□□ 0.86
Shank3Q4ACU6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Shank3Q4ACU6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Shank3Q4ACU6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shank3Q4ACU6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shank3Q4ACU6 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Shank3Q4ACU6 Gm4899-201ENSMUST00000178708 719 ntBASIC20.39■□□□□ 0.86
Shank3Q4ACU6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC20.39■□□□□ 0.86
Shank3Q4ACU6 AC154572.2-201ENSMUST00000225105 997 ntBASIC20.39■□□□□ 0.86
Shank3Q4ACU6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Shank3Q4ACU6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shank3Q4ACU6 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC20.39■□□□□ 0.85
Shank3Q4ACU6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shank3Q4ACU6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shank3Q4ACU6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Shank3Q4ACU6 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC20.39■□□□□ 0.85
Shank3Q4ACU6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shank3Q4ACU6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Gm8825-201ENSMUST00000182565 998 ntBASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Mir6956-201ENSMUST00000183598 62 ntBASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.38■□□□□ 0.85
Shank3Q4ACU6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Shank3Q4ACU6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC20.37■□□□□ 0.85
Shank3Q4ACU6 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank3Q4ACU6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Shank3Q4ACU6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Shank3Q4ACU6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Shank3Q4ACU6 Gm18622-201ENSMUST00000219361 595 ntBASIC20.37■□□□□ 0.85
Shank3Q4ACU6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank3Q4ACU6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank3Q4ACU6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Shank3Q4ACU6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Shank3Q4ACU6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Shank3Q4ACU6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank3Q4ACU6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank3Q4ACU6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank3Q4ACU6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shank3Q4ACU6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.37■□□□□ 0.85
Shank3Q4ACU6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms