Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Vars2Q3U2A8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vars2Q3U2A8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vars2Q3U2A8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vars2Q3U2A8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC20.39■□□□□ 0.85
Vars2Q3U2A8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC20.39■□□□□ 0.85
Vars2Q3U2A8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC20.39■□□□□ 0.85
Vars2Q3U2A8 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC20.39■□□□□ 0.85
Vars2Q3U2A8 AC147366.1-201ENSMUST00000227671 852 ntBASIC20.39■□□□□ 0.85
Vars2Q3U2A8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vars2Q3U2A8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.39■□□□□ 0.85
Vars2Q3U2A8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vars2Q3U2A8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vars2Q3U2A8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vars2Q3U2A8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vars2Q3U2A8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vars2Q3U2A8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vars2Q3U2A8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Gm15427-201ENSMUST00000117288 531 ntBASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vars2Q3U2A8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Nrn1-204ENSMUST00000224323 1779 ntBASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Mir6404-201ENSMUST00000183699 94 ntBASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Gm36967-201ENSMUST00000193814 266 ntBASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vars2Q3U2A8 AC140397.2-201ENSMUST00000224213 834 ntBASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vars2Q3U2A8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gm11424-201ENSMUST00000121929 829 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gm4518-201ENSMUST00000182638 718 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vars2Q3U2A8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vars2Q3U2A8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vars2Q3U2A8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vars2Q3U2A8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Vars2Q3U2A8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vars2Q3U2A8 Gm12892-201ENSMUST00000117367 1146 ntBASIC20.35■□□□□ 0.85
Vars2Q3U2A8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Vars2Q3U2A8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vars2Q3U2A8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms