Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ctdnep1Q3TP92 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ctdnep1Q3TP92 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Ctdnep1Q3TP92 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ctdnep1Q3TP92 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ctdnep1Q3TP92 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ctdnep1Q3TP92 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.02■□□□□ 0.64
Ctdnep1Q3TP92 Gm36967-201ENSMUST00000193814 266 ntBASIC19.02■□□□□ 0.64
Ctdnep1Q3TP92 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ctdnep1Q3TP92 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ctdnep1Q3TP92 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ctdnep1Q3TP92 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ctdnep1Q3TP92 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ctdnep1Q3TP92 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ctdnep1Q3TP92 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ctdnep1Q3TP92 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ctdnep1Q3TP92 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ctdnep1Q3TP92 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Gm14464-201ENSMUST00000119658 1254 ntBASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Gm27389-201ENSMUST00000183622 195 ntBASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctdnep1Q3TP92 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.99■□□□□ 0.63
Ctdnep1Q3TP92 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ctdnep1Q3TP92 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ctdnep1Q3TP92 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.99■□□□□ 0.63
Ctdnep1Q3TP92 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ctdnep1Q3TP92 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ctdnep1Q3TP92 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ctdnep1Q3TP92 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Ctdnep1Q3TP92 Gm18101-201ENSMUST00000215769 548 ntBASIC18.99■□□□□ 0.63
Ctdnep1Q3TP92 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ctdnep1Q3TP92 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms