Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC23.31■■□□□ 1.32
Trpm1Q2TV84 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trpm1Q2TV84 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trpm1Q2TV84 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trpm1Q2TV84 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trpm1Q2TV84 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trpm1Q2TV84 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC23.31■■□□□ 1.32
Trpm1Q2TV84 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Best4-ps-201ENSMUST00000129783 1380 ntBASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Gm11745-201ENSMUST00000121669 448 ntBASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Zcchc6-207ENSMUST00000225576 2499 ntBASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 AA543401-201ENSMUST00000164248 1269 ntBASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Gm44335-201ENSMUST00000196879 141 ntBASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Gm44297-201ENSMUST00000198304 141 ntBASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Gm44346-201ENSMUST00000198851 141 ntBASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC23.3■■□□□ 1.32
Trpm1Q2TV84 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 AC139382.1-201ENSMUST00000221402 498 ntBASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Dmtn-207ENSMUST00000228001 2437 ntBASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trpm1Q2TV84 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trpm1Q2TV84 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trpm1Q2TV84 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trpm1Q2TV84 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC23.28■■□□□ 1.32
Trpm1Q2TV84 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trpm1Q2TV84 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Trpm1Q2TV84 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trpm1Q2TV84 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC23.28■■□□□ 1.32
Trpm1Q2TV84 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trpm1Q2TV84 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Trpm1Q2TV84 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC23.28■■□□□ 1.32
Trpm1Q2TV84 Gm37519-201ENSMUST00000191687 2210 ntBASIC23.27■■□□□ 1.32
Trpm1Q2TV84 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC23.27■■□□□ 1.32
Trpm1Q2TV84 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC23.27■■□□□ 1.32
Trpm1Q2TV84 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trpm1Q2TV84 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trpm1Q2TV84 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trpm1Q2TV84 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trpm1Q2TV84 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trpm1Q2TV84 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trpm1Q2TV84 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trpm1Q2TV84 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trpm1Q2TV84 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trpm1Q2TV84 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trpm1Q2TV84 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
Trpm1Q2TV84 Gm45747-201ENSMUST00000212203 999 ntBASIC23.26■■□□□ 1.31
Trpm1Q2TV84 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trpm1Q2TV84 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC23.26■■□□□ 1.31
Trpm1Q2TV84 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trpm1Q2TV84 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
Trpm1Q2TV84 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trpm1Q2TV84 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trpm1Q2TV84 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trpm1Q2TV84 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trpm1Q2TV84 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trpm1Q2TV84 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trpm1Q2TV84 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms