Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim72Q1XH17 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Gm9013-201ENSMUST00000132939 882 ntBASIC17.55■□□□□ 0.4
Trim72Q1XH17 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.55■□□□□ 0.4
Trim72Q1XH17 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.55■□□□□ 0.4
Trim72Q1XH17 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.55■□□□□ 0.4
Trim72Q1XH17 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim72Q1XH17 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trim72Q1XH17 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim72Q1XH17 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim72Q1XH17 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim72Q1XH17 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trim72Q1XH17 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim72Q1XH17 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim72Q1XH17 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim72Q1XH17 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trim72Q1XH17 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim72Q1XH17 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim72Q1XH17 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim72Q1XH17 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim72Q1XH17 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim72Q1XH17 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim72Q1XH17 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim72Q1XH17 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim72Q1XH17 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim72Q1XH17 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Trim72Q1XH17 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim72Q1XH17 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim72Q1XH17 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Gm13836-201ENSMUST00000121159 501 ntBASIC17.53■□□□□ 0.4
Trim72Q1XH17 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim72Q1XH17 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim72Q1XH17 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.53■□□□□ 0.4
Trim72Q1XH17 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim72Q1XH17 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.53■□□□□ 0.4
Trim72Q1XH17 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim72Q1XH17 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trim72Q1XH17 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim72Q1XH17 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim72Q1XH17 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim72Q1XH17 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trim72Q1XH17 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.52■□□□□ 0.4
Trim72Q1XH17 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms