Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Hspg2Q05793 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hspg2Q05793 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Gm44430-201ENSMUST00000203376 995 ntBASIC12.09□□□□□ -0.47
Hspg2Q05793 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Hspg2Q05793 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.09□□□□□ -0.47
Hspg2Q05793 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.09□□□□□ -0.47
Hspg2Q05793 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.09□□□□□ -0.47
Hspg2Q05793 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.09□□□□□ -0.47
Hspg2Q05793 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.09□□□□□ -0.47
Hspg2Q05793 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.08□□□□□ -0.47
Hspg2Q05793 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hspg2Q05793 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.08□□□□□ -0.48
Hspg2Q05793 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hspg2Q05793 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.08□□□□□ -0.48
Hspg2Q05793 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hspg2Q05793 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hspg2Q05793 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hspg2Q05793 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hspg2Q05793 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.08□□□□□ -0.48
Hspg2Q05793 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hspg2Q05793 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hspg2Q05793 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Hspg2Q05793 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hspg2Q05793 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.08□□□□□ -0.48
Hspg2Q05793 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hspg2Q05793 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hspg2Q05793 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hspg2Q05793 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hspg2Q05793 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Hspg2Q05793 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hspg2Q05793 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hspg2Q05793 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hspg2Q05793 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hspg2Q05793 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hspg2Q05793 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Hspg2Q05793 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.08□□□□□ -0.48
Hspg2Q05793 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.08□□□□□ -0.48
Hspg2Q05793 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hspg2Q05793 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hspg2Q05793 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.07□□□□□ -0.48
Hspg2Q05793 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Hspg2Q05793 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hspg2Q05793 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.07□□□□□ -0.48
Hspg2Q05793 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.07□□□□□ -0.48
Hspg2Q05793 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hspg2Q05793 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hspg2Q05793 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Hspg2Q05793 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hspg2Q05793 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hspg2Q05793 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hspg2Q05793 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hspg2Q05793 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hspg2Q05793 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.06□□□□□ -0.48
Hspg2Q05793 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hspg2Q05793 Gm25745-201ENSMUST00000174945 133 ntBASIC12.06□□□□□ -0.48
Hspg2Q05793 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hspg2Q05793 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hspg2Q05793 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hspg2Q05793 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hspg2Q05793 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hspg2Q05793 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Hspg2Q05793 Gm11025-201ENSMUST00000140773 466 ntBASIC12.06□□□□□ -0.48
Hspg2Q05793 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.06□□□□□ -0.48
Hspg2Q05793 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms