Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx3-2P97503 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx3-2P97503 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Nkx3-2P97503 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.53■□□□□ 0.08
Nkx3-2P97503 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.53■□□□□ 0.08
Nkx3-2P97503 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nkx3-2P97503 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx3-2P97503 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx3-2P97503 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.52■□□□□ 0.08
Nkx3-2P97503 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx3-2P97503 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx3-2P97503 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx3-2P97503 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx3-2P97503 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx3-2P97503 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx3-2P97503 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx3-2P97503 Gm28033-201ENSMUST00000184224 96 ntBASIC15.52■□□□□ 0.08
Nkx3-2P97503 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx3-2P97503 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx3-2P97503 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx3-2P97503 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Nkx3-2P97503 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Nkx3-2P97503 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.52■□□□□ 0.07
Nkx3-2P97503 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx3-2P97503 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx3-2P97503 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx3-2P97503 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Gm29707-201ENSMUST00000196325 491 ntBASIC15.51■□□□□ 0.07
Nkx3-2P97503 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx3-2P97503 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.5■□□□□ 0.07
Nkx3-2P97503 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx3-2P97503 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx3-2P97503 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx3-2P97503 Mir3081-201ENSMUST00000175305 84 ntBASIC15.5■□□□□ 0.07
Nkx3-2P97503 Gm27741-201ENSMUST00000185060 237 ntBASIC15.5■□□□□ 0.07
Nkx3-2P97503 Gm44450-201ENSMUST00000199528 114 ntBASIC15.5■□□□□ 0.07
Nkx3-2P97503 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx3-2P97503 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx3-2P97503 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx3-2P97503 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx3-2P97503 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx3-2P97503 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkx3-2P97503 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms