Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm43630-201ENSMUST00000201550 776 ntBASIC11.24□□□□□ -0.61
PrkdcP97313 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.24□□□□□ -0.61
PrkdcP97313 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
PrkdcP97313 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PrkdcP97313 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PrkdcP97313 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PrkdcP97313 Gm15743-202ENSMUST00000182690 1901 ntBASIC11.24□□□□□ -0.61
PrkdcP97313 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PrkdcP97313 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PrkdcP97313 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PrkdcP97313 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PrkdcP97313 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
PrkdcP97313 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PrkdcP97313 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PrkdcP97313 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PrkdcP97313 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PrkdcP97313 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.23□□□□□ -0.61
PrkdcP97313 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.23□□□□□ -0.61
PrkdcP97313 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.23□□□□□ -0.61
PrkdcP97313 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PrkdcP97313 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.23□□□□□ -0.61
PrkdcP97313 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
PrkdcP97313 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
PrkdcP97313 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PrkdcP97313 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PrkdcP97313 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.23□□□□□ -0.61
PrkdcP97313 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PrkdcP97313 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
PrkdcP97313 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PrkdcP97313 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PrkdcP97313 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PrkdcP97313 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.23□□□□□ -0.61
PrkdcP97313 Gm20553-201ENSMUST00000204205 844 ntBASIC11.23□□□□□ -0.61
PrkdcP97313 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
PrkdcP97313 Gm9172-201ENSMUST00000212092 954 ntBASIC11.23□□□□□ -0.61
PrkdcP97313 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PrkdcP97313 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.23□□□□□ -0.61
PrkdcP97313 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PrkdcP97313 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC11.23□□□□□ -0.61
PrkdcP97313 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PrkdcP97313 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PrkdcP97313 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PrkdcP97313 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.22□□□□□ -0.61
PrkdcP97313 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.22□□□□□ -0.61
PrkdcP97313 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
PrkdcP97313 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
PrkdcP97313 Tfap2a-209ENSMUST00000225180 1828 ntBASIC11.22□□□□□ -0.61
PrkdcP97313 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.22□□□□□ -0.61
PrkdcP97313 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.22□□□□□ -0.61
PrkdcP97313 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.22□□□□□ -0.61
PrkdcP97313 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC11.22□□□□□ -0.61
PrkdcP97313 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
PrkdcP97313 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PrkdcP97313 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
PrkdcP97313 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
PrkdcP97313 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
PrkdcP97313 Mir6420-201ENSMUST00000185032 102 ntBASIC11.21□□□□□ -0.61
PrkdcP97313 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
PrkdcP97313 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
PrkdcP97313 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PrkdcP97313 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PrkdcP97313 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
PrkdcP97313 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
PrkdcP97313 Gm15653-201ENSMUST00000119247 907 ntBASIC11.21□□□□□ -0.61
PrkdcP97313 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
PrkdcP97313 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.21□□□□□ -0.61
PrkdcP97313 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.21□□□□□ -0.61
PrkdcP97313 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PrkdcP97313 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PrkdcP97313 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
PrkdcP97313 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.21□□□□□ -0.61
PrkdcP97313 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.21□□□□□ -0.61
PrkdcP97313 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
PrkdcP97313 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.21□□□□□ -0.61
PrkdcP97313 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PrkdcP97313 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
PrkdcP97313 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.21□□□□□ -0.62
PrkdcP97313 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.21□□□□□ -0.62
PrkdcP97313 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms