Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.9■□□□□ 0.46
Trim43cP86449 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim43cP86449 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim43cP86449 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim43cP86449 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.9■□□□□ 0.46
Trim43cP86449 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim43cP86449 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim43cP86449 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim43cP86449 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim43cP86449 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim43cP86449 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Trim43cP86449 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43cP86449 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43cP86449 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43cP86449 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Trim43cP86449 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43cP86449 Mir770-201ENSMUST00000103252 94 ntBASIC17.89■□□□□ 0.45
Trim43cP86449 Gm13836-201ENSMUST00000121159 501 ntBASIC17.89■□□□□ 0.45
Trim43cP86449 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.89■□□□□ 0.45
Trim43cP86449 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43cP86449 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43cP86449 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43cP86449 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trim43cP86449 Gm5587-201ENSMUST00000206270 674 ntBASIC17.89■□□□□ 0.45
Trim43cP86449 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.89■□□□□ 0.45
Trim43cP86449 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43cP86449 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43cP86449 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43cP86449 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43cP86449 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.89■□□□□ 0.45
Trim43cP86449 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trim43cP86449 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43cP86449 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43cP86449 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43cP86449 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.89■□□□□ 0.45
Trim43cP86449 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43cP86449 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim43cP86449 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43cP86449 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43cP86449 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.88■□□□□ 0.45
Trim43cP86449 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43cP86449 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trim43cP86449 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43cP86449 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43cP86449 Gm9013-201ENSMUST00000132939 882 ntBASIC17.88■□□□□ 0.45
Trim43cP86449 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.88■□□□□ 0.45
Trim43cP86449 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.88■□□□□ 0.45
Trim43cP86449 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43cP86449 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43cP86449 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.88■□□□□ 0.45
Trim43cP86449 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43cP86449 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trim43cP86449 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43cP86449 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43cP86449 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43cP86449 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43cP86449 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43cP86449 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim43cP86449 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.88■□□□□ 0.45
Trim43cP86449 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43cP86449 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.87■□□□□ 0.45
Trim43cP86449 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43cP86449 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43cP86449 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43cP86449 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.87■□□□□ 0.45
Trim43cP86449 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim43cP86449 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43cP86449 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43cP86449 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43cP86449 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43cP86449 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim43cP86449 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms