Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Msx3P70354 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msx3P70354 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msx3P70354 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msx3P70354 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Msx3P70354 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msx3P70354 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.92■□□□□ 0.3
Msx3P70354 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Msx3P70354 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.92■□□□□ 0.3
Msx3P70354 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Msx3P70354 Gm7889-201ENSMUST00000185591 958 ntBASIC16.92■□□□□ 0.3
Msx3P70354 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.92■□□□□ 0.3
Msx3P70354 Gm45058-201ENSMUST00000205810 766 ntBASIC16.92■□□□□ 0.3
Msx3P70354 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msx3P70354 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msx3P70354 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Msx3P70354 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msx3P70354 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msx3P70354 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msx3P70354 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msx3P70354 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.92■□□□□ 0.3
Msx3P70354 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Msx3P70354 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msx3P70354 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msx3P70354 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Msx3P70354 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msx3P70354 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msx3P70354 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msx3P70354 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Msx3P70354 Gm11336-201ENSMUST00000118168 334 ntBASIC16.91■□□□□ 0.3
Msx3P70354 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Msx3P70354 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.91■□□□□ 0.3
Msx3P70354 Gm29707-201ENSMUST00000196325 491 ntBASIC16.91■□□□□ 0.3
Msx3P70354 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.91■□□□□ 0.3
Msx3P70354 Gm18959-201ENSMUST00000208954 655 ntBASIC16.91■□□□□ 0.3
Msx3P70354 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.91■□□□□ 0.3
Msx3P70354 Gm10566-201ENSMUST00000086739 996 ntBASIC16.91■□□□□ 0.3
Msx3P70354 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msx3P70354 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.91■□□□□ 0.3
Msx3P70354 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Msx3P70354 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msx3P70354 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msx3P70354 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Msx3P70354 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msx3P70354 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.91■□□□□ 0.3
Msx3P70354 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msx3P70354 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msx3P70354 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msx3P70354 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Msx3P70354 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.9■□□□□ 0.3
Msx3P70354 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msx3P70354 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msx3P70354 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msx3P70354 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msx3P70354 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msx3P70354 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msx3P70354 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msx3P70354 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Msx3P70354 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msx3P70354 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.9■□□□□ 0.3
Msx3P70354 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msx3P70354 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msx3P70354 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Msx3P70354 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msx3P70354 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Msx3P70354 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Msx3P70354 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msx3P70354 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msx3P70354 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msx3P70354 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.89■□□□□ 0.29
Msx3P70354 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Msx3P70354 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msx3P70354 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
Msx3P70354 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msx3P70354 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.89■□□□□ 0.29
Msx3P70354 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msx3P70354 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msx3P70354 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Msx3P70354 Gm26039-201ENSMUST00000158152 144 ntBASIC16.89■□□□□ 0.29
Msx3P70354 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msx3P70354 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msx3P70354 Gm43799-201ENSMUST00000201845 579 ntBASIC16.89■□□□□ 0.29
Msx3P70354 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.89■□□□□ 0.29
Msx3P70354 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msx3P70354 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.89■□□□□ 0.29
Msx3P70354 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msx3P70354 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Msx3P70354 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msx3P70354 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.89■□□□□ 0.29
Msx3P70354 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msx3P70354 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msx3P70354 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msx3P70354 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.89■□□□□ 0.29
Msx3P70354 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msx3P70354 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msx3P70354 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.88■□□□□ 0.29
Msx3P70354 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Msx3P70354 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Msx3P70354 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Msx3P70354 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms