Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp25P57080 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Usp25P57080 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp25P57080 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp25P57080 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.67■□□□□ 0.58
Usp25P57080 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp25P57080 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp25P57080 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Usp25P57080 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.67■□□□□ 0.58
Usp25P57080 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp25P57080 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp25P57080 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Usp25P57080 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp25P57080 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp25P57080 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp25P57080 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp25P57080 Prob1-201ENSMUST00000097619 3021 ntBASIC18.66■□□□□ 0.58
Usp25P57080 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.66■□□□□ 0.58
Usp25P57080 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp25P57080 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp25P57080 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Usp25P57080 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp25P57080 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp25P57080 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp25P57080 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.66■□□□□ 0.58
Usp25P57080 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp25P57080 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp25P57080 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp25P57080 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp25P57080 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Usp25P57080 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp25P57080 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp25P57080 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Usp25P57080 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.65■□□□□ 0.58
Usp25P57080 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.65■□□□□ 0.58
Usp25P57080 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.65■□□□□ 0.58
Usp25P57080 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Usp25P57080 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp25P57080 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp25P57080 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp25P57080 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
Usp25P57080 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp25P57080 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp25P57080 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.64■□□□□ 0.58
Usp25P57080 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp25P57080 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp25P57080 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp25P57080 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp25P57080 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.64■□□□□ 0.57
Usp25P57080 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp25P57080 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp25P57080 Gm18666-201ENSMUST00000190039 958 ntBASIC18.64■□□□□ 0.57
Usp25P57080 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp25P57080 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp25P57080 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp25P57080 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.64■□□□□ 0.57
Usp25P57080 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp25P57080 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp25P57080 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp25P57080 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp25P57080 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp25P57080 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp25P57080 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp25P57080 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp25P57080 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Usp25P57080 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp25P57080 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp25P57080 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp25P57080 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Usp25P57080 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp25P57080 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp25P57080 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp25P57080 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp25P57080 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp25P57080 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp25P57080 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp25P57080 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp25P57080 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Usp25P57080 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp25P57080 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp25P57080 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp25P57080 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms