Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm13312-201ENSMUST00000119631 718 ntBASIC16.66■□□□□ 0.26
Lhx3P50481 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.66■□□□□ 0.26
Lhx3P50481 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.66■□□□□ 0.26
Lhx3P50481 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.66■□□□□ 0.26
Lhx3P50481 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.66■□□□□ 0.26
Lhx3P50481 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.66■□□□□ 0.26
Lhx3P50481 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.66■□□□□ 0.26
Lhx3P50481 Gm28033-201ENSMUST00000184224 96 ntBASIC16.66■□□□□ 0.26
Lhx3P50481 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx3P50481 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx3P50481 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx3P50481 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Lhx3P50481 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx3P50481 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx3P50481 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Lhx3P50481 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx3P50481 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx3P50481 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.65■□□□□ 0.26
Lhx3P50481 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.65■□□□□ 0.26
Lhx3P50481 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Lhx3P50481 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx3P50481 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx3P50481 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.65■□□□□ 0.26
Lhx3P50481 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx3P50481 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx3P50481 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx3P50481 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx3P50481 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx3P50481 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Lhx3P50481 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Lhx3P50481 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Lhx3P50481 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Lhx3P50481 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
Lhx3P50481 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.64■□□□□ 0.25
Lhx3P50481 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.64■□□□□ 0.25
Lhx3P50481 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.64■□□□□ 0.25
Lhx3P50481 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Lhx3P50481 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx3P50481 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx3P50481 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx3P50481 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx3P50481 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx3P50481 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx3P50481 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx3P50481 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx3P50481 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx3P50481 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.63■□□□□ 0.25
Lhx3P50481 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx3P50481 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx3P50481 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx3P50481 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx3P50481 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx3P50481 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx3P50481 Haglr-201ENSMUST00000100000 2085 ntBASIC16.63■□□□□ 0.25
Lhx3P50481 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.62■□□□□ 0.25
Lhx3P50481 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Lhx3P50481 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.62■□□□□ 0.25
Lhx3P50481 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx3P50481 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Lhx3P50481 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx3P50481 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx3P50481 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Lhx3P50481 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx3P50481 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms