Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LtbrP50284 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LtbrP50284 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LtbrP50284 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LtbrP50284 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LtbrP50284 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.28■□□□□ 0.68
LtbrP50284 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LtbrP50284 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LtbrP50284 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.27■□□□□ 0.68
LtbrP50284 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LtbrP50284 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.27■□□□□ 0.68
LtbrP50284 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LtbrP50284 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
LtbrP50284 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LtbrP50284 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LtbrP50284 Gm26308-201ENSMUST00000157768 69 ntBASIC19.27■□□□□ 0.68
LtbrP50284 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LtbrP50284 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LtbrP50284 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LtbrP50284 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LtbrP50284 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LtbrP50284 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LtbrP50284 Gm15590-201ENSMUST00000078419 552 ntBASIC19.27■□□□□ 0.68
LtbrP50284 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LtbrP50284 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LtbrP50284 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.27■□□□□ 0.68
LtbrP50284 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LtbrP50284 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LtbrP50284 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LtbrP50284 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LtbrP50284 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LtbrP50284 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LtbrP50284 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LtbrP50284 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LtbrP50284 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
LtbrP50284 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.26■□□□□ 0.67
LtbrP50284 Gm7230-201ENSMUST00000173026 815 ntBASIC19.26■□□□□ 0.67
LtbrP50284 Gm27000-201ENSMUST00000182943 842 ntBASIC19.26■□□□□ 0.67
LtbrP50284 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LtbrP50284 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LtbrP50284 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LtbrP50284 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LtbrP50284 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LtbrP50284 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LtbrP50284 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LtbrP50284 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LtbrP50284 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LtbrP50284 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.25■□□□□ 0.67
LtbrP50284 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LtbrP50284 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LtbrP50284 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.25■□□□□ 0.67
LtbrP50284 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.25■□□□□ 0.67
LtbrP50284 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LtbrP50284 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LtbrP50284 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LtbrP50284 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LtbrP50284 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LtbrP50284 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LtbrP50284 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LtbrP50284 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LtbrP50284 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LtbrP50284 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
LtbrP50284 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LtbrP50284 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LtbrP50284 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LtbrP50284 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LtbrP50284 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LtbrP50284 Gm25990-201ENSMUST00000102440 86 ntBASIC19.24■□□□□ 0.67
LtbrP50284 Gm14140-201ENSMUST00000119999 995 ntBASIC19.24■□□□□ 0.67
LtbrP50284 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.24■□□□□ 0.67
LtbrP50284 Gm9727-201ENSMUST00000161387 555 ntBASIC19.24■□□□□ 0.67
LtbrP50284 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LtbrP50284 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.24■□□□□ 0.67
LtbrP50284 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.24■□□□□ 0.67
LtbrP50284 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.24■□□□□ 0.67
LtbrP50284 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LtbrP50284 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LtbrP50284 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LtbrP50284 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LtbrP50284 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LtbrP50284 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LtbrP50284 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LtbrP50284 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LtbrP50284 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LtbrP50284 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LtbrP50284 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LtbrP50284 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LtbrP50284 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LtbrP50284 Gm15173-201ENSMUST00000122049 433 ntBASIC19.23■□□□□ 0.67
LtbrP50284 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LtbrP50284 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LtbrP50284 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.23■□□□□ 0.67
LtbrP50284 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LtbrP50284 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LtbrP50284 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LtbrP50284 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
LtbrP50284 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LtbrP50284 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LtbrP50284 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LtbrP50284 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms