Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Atoh1P48985 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Atoh1P48985 Chchd1-203ENSMUST00000224633 557 ntBASIC18.57■□□□□ 0.56
Atoh1P48985 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atoh1P48985 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atoh1P48985 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atoh1P48985 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Atoh1P48985 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atoh1P48985 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.57■□□□□ 0.56
Atoh1P48985 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Atoh1P48985 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Atoh1P48985 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.57■□□□□ 0.56
Atoh1P48985 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atoh1P48985 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atoh1P48985 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atoh1P48985 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atoh1P48985 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atoh1P48985 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atoh1P48985 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Atoh1P48985 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atoh1P48985 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Atoh1P48985 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atoh1P48985 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atoh1P48985 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atoh1P48985 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.56■□□□□ 0.56
Atoh1P48985 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atoh1P48985 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atoh1P48985 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.56■□□□□ 0.56
Atoh1P48985 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atoh1P48985 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atoh1P48985 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
Atoh1P48985 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atoh1P48985 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Atoh1P48985 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atoh1P48985 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atoh1P48985 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atoh1P48985 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Atoh1P48985 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Atoh1P48985 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.55■□□□□ 0.56
Atoh1P48985 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Atoh1P48985 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atoh1P48985 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Atoh1P48985 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atoh1P48985 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atoh1P48985 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Atoh1P48985 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atoh1P48985 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Atoh1P48985 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.55■□□□□ 0.56
Atoh1P48985 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.55■□□□□ 0.56
Atoh1P48985 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atoh1P48985 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atoh1P48985 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atoh1P48985 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Atoh1P48985 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atoh1P48985 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atoh1P48985 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atoh1P48985 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atoh1P48985 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.54■□□□□ 0.56
Atoh1P48985 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Atoh1P48985 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atoh1P48985 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Atoh1P48985 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atoh1P48985 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.54■□□□□ 0.56
Atoh1P48985 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.54■□□□□ 0.56
Atoh1P48985 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atoh1P48985 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Atoh1P48985 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atoh1P48985 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Atoh1P48985 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atoh1P48985 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Atoh1P48985 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atoh1P48985 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Atoh1P48985 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.53■□□□□ 0.56
Atoh1P48985 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.53■□□□□ 0.56
Atoh1P48985 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.53■□□□□ 0.56
Atoh1P48985 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atoh1P48985 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atoh1P48985 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.53■□□□□ 0.56
Atoh1P48985 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atoh1P48985 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atoh1P48985 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Atoh1P48985 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Atoh1P48985 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.52■□□□□ 0.56
Atoh1P48985 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atoh1P48985 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atoh1P48985 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atoh1P48985 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.52■□□□□ 0.56
Atoh1P48985 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.52■□□□□ 0.56
Atoh1P48985 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.52■□□□□ 0.56
Atoh1P48985 Gm11764-201ENSMUST00000120221 623 ntBASIC18.52■□□□□ 0.56
Atoh1P48985 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.52■□□□□ 0.56
Atoh1P48985 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.52■□□□□ 0.56
Atoh1P48985 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Atoh1P48985 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Atoh1P48985 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atoh1P48985 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atoh1P48985 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atoh1P48985 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Atoh1P48985 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atoh1P48985 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms