Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rfx3P48381 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rfx3P48381 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Rfx3P48381 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.88□□□□□ -0.03
Rfx3P48381 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rfx3P48381 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx3P48381 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx3P48381 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.87□□□□□ -0.03
Rfx3P48381 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx3P48381 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx3P48381 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx3P48381 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.87□□□□□ -0.03
Rfx3P48381 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx3P48381 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx3P48381 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx3P48381 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx3P48381 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx3P48381 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx3P48381 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.87□□□□□ -0.03
Rfx3P48381 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rfx3P48381 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx3P48381 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx3P48381 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx3P48381 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx3P48381 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Rfx3P48381 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.86□□□□□ -0.03
Rfx3P48381 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rfx3P48381 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rfx3P48381 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.86□□□□□ -0.03
Rfx3P48381 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.86□□□□□ -0.03
Rfx3P48381 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Rfx3P48381 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.86□□□□□ -0.03
Rfx3P48381 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Rfx3P48381 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.86□□□□□ -0.03
Rfx3P48381 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.86□□□□□ -0.03
Rfx3P48381 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx3P48381 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx3P48381 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx3P48381 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rfx3P48381 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx3P48381 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx3P48381 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx3P48381 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rfx3P48381 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx3P48381 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rfx3P48381 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.85□□□□□ -0.03
Rfx3P48381 Gm18958-201ENSMUST00000174258 762 ntBASIC14.85□□□□□ -0.03
Rfx3P48381 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.85□□□□□ -0.03
Rfx3P48381 Gm3375-201ENSMUST00000203929 796 ntBASIC14.85□□□□□ -0.03
Rfx3P48381 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx3P48381 Gm7791-201ENSMUST00000219066 539 ntBASIC14.85□□□□□ -0.03
Rfx3P48381 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rfx3P48381 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx3P48381 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx3P48381 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Rfx3P48381 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rfx3P48381 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx3P48381 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx3P48381 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms