Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.98■□□□□ 0.31
Msh2P43247 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Msh2P43247 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.97■□□□□ 0.31
Msh2P43247 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Msh2P43247 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Msh2P43247 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.97■□□□□ 0.31
Msh2P43247 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.97■□□□□ 0.31
Msh2P43247 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.97■□□□□ 0.31
Msh2P43247 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.97■□□□□ 0.31
Msh2P43247 Gm37025-201ENSMUST00000195159 829 ntBASIC16.97■□□□□ 0.31
Msh2P43247 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.97■□□□□ 0.31
Msh2P43247 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Msh2P43247 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh2P43247 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh2P43247 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh2P43247 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh2P43247 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh2P43247 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh2P43247 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh2P43247 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Msh2P43247 Gm7638-201ENSMUST00000121348 967 ntBASIC16.96■□□□□ 0.31
Msh2P43247 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.96■□□□□ 0.31
Msh2P43247 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.96■□□□□ 0.31
Msh2P43247 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh2P43247 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh2P43247 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.96■□□□□ 0.31
Msh2P43247 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh2P43247 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh2P43247 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh2P43247 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Msh2P43247 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Msh2P43247 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Msh2P43247 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Msh2P43247 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Msh2P43247 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh2P43247 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh2P43247 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Msh2P43247 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh2P43247 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh2P43247 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh2P43247 Gm15565-201ENSMUST00000118890 427 ntBASIC16.95■□□□□ 0.3
Msh2P43247 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Msh2P43247 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Msh2P43247 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh2P43247 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.95■□□□□ 0.3
Msh2P43247 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh2P43247 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Msh2P43247 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh2P43247 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.95■□□□□ 0.3
Msh2P43247 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh2P43247 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Msh2P43247 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Msh2P43247 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh2P43247 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Msh2P43247 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Msh2P43247 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh2P43247 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh2P43247 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh2P43247 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh2P43247 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh2P43247 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Msh2P43247 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh2P43247 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Msh2P43247 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh2P43247 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh2P43247 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Msh2P43247 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh2P43247 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh2P43247 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh2P43247 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Msh2P43247 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Msh2P43247 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh2P43247 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Msh2P43247 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh2P43247 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh2P43247 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Msh2P43247 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh2P43247 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Msh2P43247 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Msh2P43247 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Msh2P43247 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Msh2P43247 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Msh2P43247 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms