Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd27P41272 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd27P41272 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd27P41272 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd27P41272 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd27P41272 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd27P41272 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd27P41272 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cd27P41272 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd27P41272 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cd27P41272 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd27P41272 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd27P41272 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cd27P41272 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cd27P41272 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd27P41272 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cd27P41272 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd27P41272 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cd27P41272 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.18□□□□□ -0.3
Cd27P41272 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd27P41272 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cd27P41272 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.17□□□□□ -0.3
Cd27P41272 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Cd27P41272 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.17□□□□□ -0.3
Cd27P41272 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Cd27P41272 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.17□□□□□ -0.3
Cd27P41272 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.17□□□□□ -0.3
Cd27P41272 Gm25016-201ENSMUST00000158399 131 ntBASIC13.17□□□□□ -0.3
Cd27P41272 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cd27P41272 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cd27P41272 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.17□□□□□ -0.3
Cd27P41272 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.17□□□□□ -0.3
Cd27P41272 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cd27P41272 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cd27P41272 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cd27P41272 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.16□□□□□ -0.3
Cd27P41272 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Cd27P41272 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Cd27P41272 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
Cd27P41272 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.16□□□□□ -0.3
Cd27P41272 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cd27P41272 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd27P41272 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd27P41272 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cd27P41272 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cd27P41272 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd27P41272 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.15□□□□□ -0.3
Cd27P41272 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd27P41272 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd27P41272 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd27P41272 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd27P41272 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd27P41272 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd27P41272 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd27P41272 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Cd27P41272 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd27P41272 Gm15794-201ENSMUST00000120182 631 ntBASIC13.15□□□□□ -0.3
Cd27P41272 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cd27P41272 Gm36967-201ENSMUST00000193814 266 ntBASIC13.15□□□□□ -0.3
Cd27P41272 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cd27P41272 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Cd27P41272 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd27P41272 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms