Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Timp3P39876 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Timp3P39876 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Timp3P39876 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Timp3P39876 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.48□□□□□ -0.25
Timp3P39876 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.48□□□□□ -0.25
Timp3P39876 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Timp3P39876 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.48□□□□□ -0.25
Timp3P39876 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Timp3P39876 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Timp3P39876 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Timp3P39876 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.47□□□□□ -0.25
Timp3P39876 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.47□□□□□ -0.25
Timp3P39876 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Timp3P39876 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.47□□□□□ -0.25
Timp3P39876 Gm37722-201ENSMUST00000193757 208 ntBASIC13.47□□□□□ -0.25
Timp3P39876 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Gm10566-201ENSMUST00000086739 996 ntBASIC13.47□□□□□ -0.25
Timp3P39876 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Timp3P39876 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Timp3P39876 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Timp3P39876 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.46□□□□□ -0.25
Timp3P39876 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Timp3P39876 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Timp3P39876 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Timp3P39876 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.46□□□□□ -0.25
Timp3P39876 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Timp3P39876 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.46□□□□□ -0.25
Timp3P39876 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Timp3P39876 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Timp3P39876 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Timp3P39876 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Timp3P39876 Gm13216-201ENSMUST00000117145 591 ntBASIC13.46□□□□□ -0.25
Timp3P39876 Gm6623-201ENSMUST00000173570 544 ntBASIC13.46□□□□□ -0.25
Timp3P39876 Gm45328-201ENSMUST00000210942 917 ntBASIC13.46□□□□□ -0.25
Timp3P39876 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Timp3P39876 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.46□□□□□ -0.25
Timp3P39876 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Timp3P39876 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Timp3P39876 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Timp3P39876 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Timp3P39876 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Timp3P39876 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Timp3P39876 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Timp3P39876 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Timp3P39876 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Timp3P39876 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.46□□□□□ -0.26
Timp3P39876 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Timp3P39876 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Timp3P39876 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.46□□□□□ -0.26
Timp3P39876 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Timp3P39876 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Timp3P39876 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Timp3P39876 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.45□□□□□ -0.26
Timp3P39876 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.45□□□□□ -0.26
Timp3P39876 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.45□□□□□ -0.26
Timp3P39876 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.45□□□□□ -0.26
Timp3P39876 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Timp3P39876 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.45□□□□□ -0.26
Timp3P39876 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Timp3P39876 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms