Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HmgclP38060 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HmgclP38060 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HmgclP38060 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HmgclP38060 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HmgclP38060 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.22■□□□□ 0.19
HmgclP38060 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HmgclP38060 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.22■□□□□ 0.19
HmgclP38060 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.22■□□□□ 0.19
HmgclP38060 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.22■□□□□ 0.19
HmgclP38060 Gm36967-201ENSMUST00000193814 266 ntBASIC16.22■□□□□ 0.19
HmgclP38060 Gm5587-201ENSMUST00000206270 674 ntBASIC16.22■□□□□ 0.19
HmgclP38060 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HmgclP38060 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HmgclP38060 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HmgclP38060 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.22■□□□□ 0.19
HmgclP38060 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HmgclP38060 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HmgclP38060 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HmgclP38060 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HmgclP38060 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HmgclP38060 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HmgclP38060 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HmgclP38060 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HmgclP38060 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HmgclP38060 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HmgclP38060 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HmgclP38060 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HmgclP38060 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HmgclP38060 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HmgclP38060 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HmgclP38060 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HmgclP38060 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HmgclP38060 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HmgclP38060 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HmgclP38060 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HmgclP38060 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.21■□□□□ 0.19
HmgclP38060 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HmgclP38060 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HmgclP38060 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HmgclP38060 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HmgclP38060 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HmgclP38060 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.21■□□□□ 0.19
HmgclP38060 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HmgclP38060 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.21■□□□□ 0.19
HmgclP38060 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HmgclP38060 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.2■□□□□ 0.18
HmgclP38060 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HmgclP38060 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HmgclP38060 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HmgclP38060 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HmgclP38060 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HmgclP38060 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HmgclP38060 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HmgclP38060 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HmgclP38060 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HmgclP38060 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HmgclP38060 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HmgclP38060 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HmgclP38060 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.2■□□□□ 0.18
HmgclP38060 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.2■□□□□ 0.18
HmgclP38060 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HmgclP38060 Gm6659-201ENSMUST00000174752 547 ntBASIC16.2■□□□□ 0.18
HmgclP38060 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.2■□□□□ 0.18
HmgclP38060 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HmgclP38060 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.2■□□□□ 0.18
HmgclP38060 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
HmgclP38060 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HmgclP38060 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HmgclP38060 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HmgclP38060 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HmgclP38060 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HmgclP38060 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Mir770-201ENSMUST00000103252 94 ntBASIC16.19■□□□□ 0.18
HmgclP38060 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
HmgclP38060 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HmgclP38060 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HmgclP38060 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HmgclP38060 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
HmgclP38060 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HmgclP38060 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HmgclP38060 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HmgclP38060 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HmgclP38060 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms