Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pde6bP23440 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6bP23440 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6bP23440 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6bP23440 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6bP23440 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6bP23440 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6bP23440 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pde6bP23440 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6bP23440 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6bP23440 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.9■□□□□ 0.46
Pde6bP23440 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.9■□□□□ 0.46
Pde6bP23440 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.9■□□□□ 0.46
Pde6bP23440 Gm10052-201ENSMUST00000168019 960 ntBASIC17.9■□□□□ 0.46
Pde6bP23440 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pde6bP23440 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6bP23440 Gm7729-201ENSMUST00000050143 801 ntBASIC17.9■□□□□ 0.46
Pde6bP23440 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6bP23440 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6bP23440 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.9■□□□□ 0.46
Pde6bP23440 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6bP23440 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6bP23440 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6bP23440 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6bP23440 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pde6bP23440 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6bP23440 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6bP23440 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6bP23440 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pde6bP23440 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.89■□□□□ 0.46
Pde6bP23440 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6bP23440 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Pde6bP23440 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6bP23440 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6bP23440 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6bP23440 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Pde6bP23440 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6bP23440 Gm6443-201ENSMUST00000203599 874 ntBASIC17.89■□□□□ 0.45
Pde6bP23440 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6bP23440 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.89■□□□□ 0.45
Pde6bP23440 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6bP23440 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pde6bP23440 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6bP23440 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pde6bP23440 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.88■□□□□ 0.45
Pde6bP23440 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.88■□□□□ 0.45
Pde6bP23440 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6bP23440 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6bP23440 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6bP23440 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pde6bP23440 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6bP23440 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6bP23440 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6bP23440 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6bP23440 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.88■□□□□ 0.45
Pde6bP23440 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.88■□□□□ 0.45
Pde6bP23440 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6bP23440 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.88■□□□□ 0.45
Pde6bP23440 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pde6bP23440 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6bP23440 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6bP23440 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6bP23440 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.88■□□□□ 0.45
Pde6bP23440 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6bP23440 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pde6bP23440 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6bP23440 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6bP23440 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6bP23440 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.87■□□□□ 0.45
Pde6bP23440 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6bP23440 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Pde6bP23440 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6bP23440 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6bP23440 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.87■□□□□ 0.45
Pde6bP23440 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6bP23440 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6bP23440 Rprl3-201ENSMUST00000157400 290 ntBASIC17.87■□□□□ 0.45
Pde6bP23440 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.87■□□□□ 0.45
Pde6bP23440 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.87■□□□□ 0.45
Pde6bP23440 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6bP23440 Gm43514-201ENSMUST00000198852 424 ntBASIC17.87■□□□□ 0.45
Pde6bP23440 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.87■□□□□ 0.45
Pde6bP23440 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6bP23440 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6bP23440 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Pde6bP23440 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Pde6bP23440 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.87■□□□□ 0.45
Pde6bP23440 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6bP23440 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pde6bP23440 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6bP23440 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
Pde6bP23440 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.87■□□□□ 0.45
Pde6bP23440 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pde6bP23440 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Pde6bP23440 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Pde6bP23440 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pde6bP23440 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6bP23440 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6bP23440 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6bP23440 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms