Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VimP20152 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.82■□□□□ 0.28
VimP20152 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
VimP20152 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.82■□□□□ 0.28
VimP20152 Zfp783-201ENSMUST00000095946 670 ntBASIC16.82■□□□□ 0.28
VimP20152 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VimP20152 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VimP20152 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VimP20152 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VimP20152 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VimP20152 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VimP20152 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VimP20152 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VimP20152 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
VimP20152 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VimP20152 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VimP20152 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VimP20152 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.81■□□□□ 0.28
VimP20152 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VimP20152 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VimP20152 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VimP20152 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
VimP20152 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VimP20152 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VimP20152 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VimP20152 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VimP20152 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VimP20152 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VimP20152 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VimP20152 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.8■□□□□ 0.28
VimP20152 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.8■□□□□ 0.28
VimP20152 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.8■□□□□ 0.28
VimP20152 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
VimP20152 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VimP20152 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VimP20152 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VimP20152 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
VimP20152 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VimP20152 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VimP20152 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VimP20152 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VimP20152 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VimP20152 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.8■□□□□ 0.28
VimP20152 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.79■□□□□ 0.28
VimP20152 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.79■□□□□ 0.28
VimP20152 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VimP20152 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.78■□□□□ 0.28
VimP20152 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.78■□□□□ 0.28
VimP20152 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VimP20152 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.78■□□□□ 0.28
VimP20152 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Gm2399-201ENSMUST00000104944 225 ntBASIC16.78■□□□□ 0.28
VimP20152 Gm12821-201ENSMUST00000120022 600 ntBASIC16.78■□□□□ 0.28
VimP20152 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Gm42778-201ENSMUST00000199644 553 ntBASIC16.78■□□□□ 0.28
VimP20152 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.78■□□□□ 0.28
VimP20152 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
VimP20152 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VimP20152 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VimP20152 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
VimP20152 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
VimP20152 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VimP20152 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VimP20152 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms