Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp53P15975 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp53P15975 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp53P15975 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19■□□□□ 0.63
Usp53P15975 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp53P15975 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp53P15975 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Usp53P15975 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp53P15975 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp53P15975 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp53P15975 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19■□□□□ 0.63
Usp53P15975 Birc2-201ENSMUST00000054878 378 ntBASIC19■□□□□ 0.63
Usp53P15975 Gm7461-201ENSMUST00000058918 827 ntBASIC19■□□□□ 0.63
Usp53P15975 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Usp53P15975 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp53P15975 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp53P15975 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp53P15975 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp53P15975 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Usp53P15975 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Usp53P15975 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp53P15975 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Usp53P15975 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp53P15975 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp53P15975 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp53P15975 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp53P15975 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp53P15975 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp53P15975 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp53P15975 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp53P15975 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp53P15975 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp53P15975 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
Usp53P15975 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Usp53P15975 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Usp53P15975 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Usp53P15975 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp53P15975 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp53P15975 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.99■□□□□ 0.63
Usp53P15975 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.99■□□□□ 0.63
Usp53P15975 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp53P15975 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp53P15975 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp53P15975 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp53P15975 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp53P15975 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.98■□□□□ 0.63
Usp53P15975 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.98■□□□□ 0.63
Usp53P15975 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp53P15975 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Usp53P15975 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp53P15975 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usp53P15975 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Usp53P15975 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usp53P15975 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.98■□□□□ 0.63
Usp53P15975 Gm27867-201ENSMUST00000184778 125 ntBASIC18.98■□□□□ 0.63
Usp53P15975 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.98■□□□□ 0.63
Usp53P15975 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.98■□□□□ 0.63
Usp53P15975 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp53P15975 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp53P15975 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp53P15975 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp53P15975 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp53P15975 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Usp53P15975 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp53P15975 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp53P15975 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp53P15975 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp53P15975 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.97■□□□□ 0.63
Usp53P15975 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.97■□□□□ 0.63
Usp53P15975 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.97■□□□□ 0.63
Usp53P15975 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.97■□□□□ 0.63
Usp53P15975 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.97■□□□□ 0.63
Usp53P15975 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp53P15975 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp53P15975 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Usp53P15975 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp53P15975 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp53P15975 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp53P15975 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usp53P15975 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp53P15975 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp53P15975 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp53P15975 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Usp53P15975 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.96■□□□□ 0.63
Usp53P15975 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Usp53P15975 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.96■□□□□ 0.63
Usp53P15975 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.96■□□□□ 0.63
Usp53P15975 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.96■□□□□ 0.63
Usp53P15975 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.96■□□□□ 0.63
Usp53P15975 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Usp53P15975 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Usp53P15975 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp53P15975 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp53P15975 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.96■□□□□ 0.63
Usp53P15975 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp53P15975 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp53P15975 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp53P15975 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp53P15975 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp53P15975 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 180.1 ms