Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Apaf1O88879 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Apaf1O88879 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Apaf1O88879 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Apaf1O88879 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC21.37■■□□□ 1.01
Apaf1O88879 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC21.37■■□□□ 1.01
Apaf1O88879 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Apaf1O88879 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC21.37■■□□□ 1.01
Apaf1O88879 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC21.37■■□□□ 1.01
Apaf1O88879 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Apaf1O88879 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Apaf1O88879 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Apaf1O88879 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Apaf1O88879 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Apaf1O88879 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Apaf1O88879 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Apaf1O88879 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Apaf1O88879 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Apaf1O88879 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Apaf1O88879 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
Apaf1O88879 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Apaf1O88879 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Apaf1O88879 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Apaf1O88879 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Apaf1O88879 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Apaf1O88879 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC21.36■■□□□ 1.01
Apaf1O88879 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC21.36■■□□□ 1.01
Apaf1O88879 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Apaf1O88879 Gm36967-201ENSMUST00000193814 266 ntBASIC21.36■■□□□ 1.01
Apaf1O88879 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC21.36■■□□□ 1.01
Apaf1O88879 AC124569.2-201ENSMUST00000225998 818 ntBASIC21.36■■□□□ 1.01
Apaf1O88879 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Apaf1O88879 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Apaf1O88879 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Apaf1O88879 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Apaf1O88879 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Apaf1O88879 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Apaf1O88879 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
Apaf1O88879 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Apaf1O88879 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Apaf1O88879 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Apaf1O88879 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Apaf1O88879 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Apaf1O88879 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Apaf1O88879 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Apaf1O88879 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Apaf1O88879 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Apaf1O88879 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Apaf1O88879 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Apaf1O88879 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC21.35■■□□□ 1.01
Apaf1O88879 AC153794.1-201ENSMUST00000169148 126 ntBASIC21.35■■□□□ 1.01
Apaf1O88879 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Apaf1O88879 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Apaf1O88879 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC21.35■■□□□ 1.01
Apaf1O88879 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Apaf1O88879 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Apaf1O88879 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Apaf1O88879 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Apaf1O88879 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Apaf1O88879 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Apaf1O88879 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Apaf1O88879 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Apaf1O88879 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Apaf1O88879 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Apaf1O88879 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Apaf1O88879 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Apaf1O88879 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC21.34■■□□□ 1.01
Apaf1O88879 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC21.34■■□□□ 1.01
Apaf1O88879 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
Apaf1O88879 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Apaf1O88879 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Apaf1O88879 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Apaf1O88879 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Apaf1O88879 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Apaf1O88879 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Apaf1O88879 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Apaf1O88879 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Apaf1O88879 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Apaf1O88879 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Apaf1O88879 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Apaf1O88879 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Apaf1O88879 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.33■■□□□ 1.01
Apaf1O88879 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC21.33■■□□□ 1.01
Apaf1O88879 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
Apaf1O88879 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Apaf1O88879 Gm17971-201ENSMUST00000190239 806 ntBASIC21.33■■□□□ 1.01
Apaf1O88879 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Apaf1O88879 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC21.33■■□□□ 1
Apaf1O88879 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC21.32■■□□□ 1
Apaf1O88879 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC21.32■■□□□ 1
Apaf1O88879 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21.32■■□□□ 1
Apaf1O88879 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Apaf1O88879 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.32■■□□□ 1
Apaf1O88879 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Apaf1O88879 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Apaf1O88879 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Apaf1O88879 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Apaf1O88879 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Apaf1O88879 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC21.32■■□□□ 1
Apaf1O88879 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms