Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shoc2O88520 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shoc2O88520 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shoc2O88520 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shoc2O88520 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.02■□□□□ 0.32
Shoc2O88520 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shoc2O88520 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shoc2O88520 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shoc2O88520 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.02■□□□□ 0.32
Shoc2O88520 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Shoc2O88520 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Shoc2O88520 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.02■□□□□ 0.32
Shoc2O88520 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shoc2O88520 Gm10566-201ENSMUST00000086739 996 ntBASIC17.02■□□□□ 0.32
Shoc2O88520 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shoc2O88520 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Shoc2O88520 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.02■□□□□ 0.31
Shoc2O88520 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shoc2O88520 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Shoc2O88520 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Shoc2O88520 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Shoc2O88520 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.01■□□□□ 0.31
Shoc2O88520 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shoc2O88520 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shoc2O88520 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shoc2O88520 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.01■□□□□ 0.31
Shoc2O88520 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.01■□□□□ 0.31
Shoc2O88520 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shoc2O88520 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shoc2O88520 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shoc2O88520 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shoc2O88520 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shoc2O88520 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shoc2O88520 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.01■□□□□ 0.31
Shoc2O88520 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shoc2O88520 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shoc2O88520 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shoc2O88520 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shoc2O88520 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.01■□□□□ 0.31
Shoc2O88520 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shoc2O88520 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shoc2O88520 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shoc2O88520 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shoc2O88520 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Shoc2O88520 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shoc2O88520 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shoc2O88520 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Shoc2O88520 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shoc2O88520 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17■□□□□ 0.31
Shoc2O88520 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Shoc2O88520 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shoc2O88520 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17■□□□□ 0.31
Shoc2O88520 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17■□□□□ 0.31
Shoc2O88520 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shoc2O88520 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shoc2O88520 Gm45203-201ENSMUST00000206384 1831 ntBASIC17■□□□□ 0.31
Shoc2O88520 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Shoc2O88520 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shoc2O88520 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Shoc2O88520 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Shoc2O88520 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shoc2O88520 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shoc2O88520 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shoc2O88520 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shoc2O88520 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shoc2O88520 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.99■□□□□ 0.31
Shoc2O88520 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.99■□□□□ 0.31
Shoc2O88520 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Shoc2O88520 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.99■□□□□ 0.31
Shoc2O88520 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shoc2O88520 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shoc2O88520 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shoc2O88520 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Shoc2O88520 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.99■□□□□ 0.31
Shoc2O88520 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shoc2O88520 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Shoc2O88520 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shoc2O88520 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shoc2O88520 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shoc2O88520 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shoc2O88520 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shoc2O88520 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shoc2O88520 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shoc2O88520 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Shoc2O88520 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shoc2O88520 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shoc2O88520 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.98■□□□□ 0.31
Shoc2O88520 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shoc2O88520 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.98■□□□□ 0.31
Shoc2O88520 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Shoc2O88520 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shoc2O88520 Gm22697-201ENSMUST00000175194 63 ntBASIC16.98■□□□□ 0.31
Shoc2O88520 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Shoc2O88520 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shoc2O88520 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Shoc2O88520 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shoc2O88520 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Shoc2O88520 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shoc2O88520 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shoc2O88520 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms