Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Gm10139O88245 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Gm10139O88245 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC10.03□□□□□ -0.8
Gm10139O88245 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC10.03□□□□□ -0.8
Gm10139O88245 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC10.03□□□□□ -0.8
Gm10139O88245 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC10.03□□□□□ -0.8
Gm10139O88245 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC10.03□□□□□ -0.8
Gm10139O88245 Mir5122-201ENSMUST00000175004 89 ntBASIC10.03□□□□□ -0.8
Gm10139O88245 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Zfp264-201ENSMUST00000208656 1563 ntBASIC10.03□□□□□ -0.8
Gm10139O88245 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Gm10139O88245 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC10.03□□□□□ -0.8
Gm10139O88245 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Gm10139O88245 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Gm10139O88245 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Gm10139O88245 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC10.02□□□□□ -0.8
Gm10139O88245 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Gm10139O88245 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Gm10139O88245 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Gm10139O88245 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Gm10139O88245 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Gm10139O88245 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Gm10139O88245 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.8
Gm10139O88245 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 CT010478.1-201ENSMUST00000220747 2787 ntBASIC10.02□□□□□ -0.81
Gm10139O88245 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC10.02□□□□□ -0.81
Gm10139O88245 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Gm11539-201ENSMUST00000119837 557 ntBASIC10.02□□□□□ -0.81
Gm10139O88245 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC10.02□□□□□ -0.81
Gm10139O88245 Gm4217-201ENSMUST00000182243 1002 ntBASIC10.02□□□□□ -0.81
Gm10139O88245 Gm29257-201ENSMUST00000186115 639 ntBASIC10.02□□□□□ -0.81
Gm10139O88245 Gm44450-201ENSMUST00000199528 114 ntBASIC10.02□□□□□ -0.81
Gm10139O88245 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Gm10139O88245 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC10.02□□□□□ -0.81
Gm10139O88245 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Gm10139O88245 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10139O88245 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10139O88245 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10139O88245 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10139O88245 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10139O88245 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10139O88245 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Gm10139O88245 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms