Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Vamp4O70480 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vamp4O70480 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vamp4O70480 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.73■□□□□ 0.91
Vamp4O70480 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vamp4O70480 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
Vamp4O70480 Gm28033-201ENSMUST00000184224 96 ntBASIC20.73■□□□□ 0.91
Vamp4O70480 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.73■□□□□ 0.91
Vamp4O70480 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Vamp4O70480 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vamp4O70480 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vamp4O70480 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Vamp4O70480 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vamp4O70480 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vamp4O70480 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vamp4O70480 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Vamp4O70480 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vamp4O70480 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vamp4O70480 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vamp4O70480 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.72■□□□□ 0.91
Vamp4O70480 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vamp4O70480 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vamp4O70480 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vamp4O70480 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.72■□□□□ 0.91
Vamp4O70480 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.72■□□□□ 0.91
Vamp4O70480 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.72■□□□□ 0.91
Vamp4O70480 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vamp4O70480 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vamp4O70480 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Vamp4O70480 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Vamp4O70480 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vamp4O70480 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vamp4O70480 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vamp4O70480 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vamp4O70480 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.71■□□□□ 0.91
Vamp4O70480 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vamp4O70480 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vamp4O70480 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vamp4O70480 Gm9103-201ENSMUST00000119371 405 ntBASIC20.71■□□□□ 0.91
Vamp4O70480 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vamp4O70480 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.71■□□□□ 0.91
Vamp4O70480 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.71■□□□□ 0.91
Vamp4O70480 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vamp4O70480 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vamp4O70480 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.71■□□□□ 0.91
Vamp4O70480 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vamp4O70480 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vamp4O70480 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Vamp4O70480 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.7■□□□□ 0.9
Vamp4O70480 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Vamp4O70480 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 Gm18669-201ENSMUST00000216049 778 ntBASIC20.7■□□□□ 0.9
Vamp4O70480 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Vamp4O70480 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Vamp4O70480 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp4O70480 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vamp4O70480 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Vamp4O70480 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vamp4O70480 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vamp4O70480 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vamp4O70480 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.69■□□□□ 0.9
Vamp4O70480 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Vamp4O70480 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.69■□□□□ 0.9
Vamp4O70480 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.69■□□□□ 0.9
Vamp4O70480 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vamp4O70480 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.69■□□□□ 0.9
Vamp4O70480 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Vamp4O70480 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Vamp4O70480 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vamp4O70480 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vamp4O70480 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vamp4O70480 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.69■□□□□ 0.9
Vamp4O70480 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vamp4O70480 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vamp4O70480 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.68■□□□□ 0.9
Vamp4O70480 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vamp4O70480 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vamp4O70480 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vamp4O70480 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Vamp4O70480 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vamp4O70480 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Vamp4O70480 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vamp4O70480 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms