Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.24■□□□□ 0.19
Pdlim1O70400 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.24■□□□□ 0.19
Pdlim1O70400 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim1O70400 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim1O70400 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim1O70400 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pdlim1O70400 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim1O70400 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim1O70400 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim1O70400 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pdlim1O70400 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim1O70400 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pdlim1O70400 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.23■□□□□ 0.19
Pdlim1O70400 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pdlim1O70400 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pdlim1O70400 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.23■□□□□ 0.19
Pdlim1O70400 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Pdlim1O70400 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 Gm10052-201ENSMUST00000168019 960 ntBASIC16.23■□□□□ 0.19
Pdlim1O70400 Gm44430-201ENSMUST00000203376 995 ntBASIC16.23■□□□□ 0.19
Pdlim1O70400 Gm7729-201ENSMUST00000050143 801 ntBASIC16.23■□□□□ 0.19
Pdlim1O70400 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pdlim1O70400 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pdlim1O70400 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.23■□□□□ 0.19
Pdlim1O70400 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim1O70400 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pdlim1O70400 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim1O70400 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim1O70400 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pdlim1O70400 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim1O70400 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim1O70400 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim1O70400 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.22■□□□□ 0.19
Pdlim1O70400 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.22■□□□□ 0.19
Pdlim1O70400 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim1O70400 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.22■□□□□ 0.19
Pdlim1O70400 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim1O70400 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim1O70400 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pdlim1O70400 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim1O70400 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim1O70400 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim1O70400 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim1O70400 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.21■□□□□ 0.19
Pdlim1O70400 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim1O70400 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim1O70400 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pdlim1O70400 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim1O70400 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim1O70400 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim1O70400 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim1O70400 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.21■□□□□ 0.19
Pdlim1O70400 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim1O70400 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim1O70400 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim1O70400 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim1O70400 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim1O70400 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim1O70400 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim1O70400 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pdlim1O70400 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim1O70400 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim1O70400 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim1O70400 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim1O70400 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pdlim1O70400 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pdlim1O70400 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.21■□□□□ 0.18
Pdlim1O70400 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim1O70400 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim1O70400 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim1O70400 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim1O70400 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.2■□□□□ 0.18
Pdlim1O70400 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim1O70400 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim1O70400 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pdlim1O70400 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim1O70400 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim1O70400 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim1O70400 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.2■□□□□ 0.18
Pdlim1O70400 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.2■□□□□ 0.18
Pdlim1O70400 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.2■□□□□ 0.18
Pdlim1O70400 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim1O70400 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pdlim1O70400 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms