Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcof1O08784 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcof1O08784 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcof1O08784 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcof1O08784 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcof1O08784 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcof1O08784 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.23■□□□□ 0.67
Tcof1O08784 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcof1O08784 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcof1O08784 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcof1O08784 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcof1O08784 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcof1O08784 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcof1O08784 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.23■□□□□ 0.67
Tcof1O08784 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.23■□□□□ 0.67
Tcof1O08784 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.23■□□□□ 0.67
Tcof1O08784 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcof1O08784 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcof1O08784 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tcof1O08784 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcof1O08784 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Tcof1O08784 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcof1O08784 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcof1O08784 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcof1O08784 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcof1O08784 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcof1O08784 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcof1O08784 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcof1O08784 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Tcof1O08784 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.22■□□□□ 0.67
Tcof1O08784 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.22■□□□□ 0.67
Tcof1O08784 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tcof1O08784 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.22■□□□□ 0.67
Tcof1O08784 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tcof1O08784 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcof1O08784 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tcof1O08784 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tcof1O08784 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tcof1O08784 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tcof1O08784 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tcof1O08784 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.21■□□□□ 0.67
Tcof1O08784 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tcof1O08784 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tcof1O08784 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tcof1O08784 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.21■□□□□ 0.67
Tcof1O08784 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tcof1O08784 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tcof1O08784 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.21■□□□□ 0.67
Tcof1O08784 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tcof1O08784 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tcof1O08784 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Tcof1O08784 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.21■□□□□ 0.67
Tcof1O08784 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Tcof1O08784 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Tcof1O08784 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tcof1O08784 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Tcof1O08784 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tcof1O08784 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Tcof1O08784 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tcof1O08784 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tcof1O08784 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tcof1O08784 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tcof1O08784 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tcof1O08784 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tcof1O08784 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.2■□□□□ 0.66
Tcof1O08784 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tcof1O08784 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tcof1O08784 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tcof1O08784 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tcof1O08784 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tcof1O08784 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tcof1O08784 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tcof1O08784 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tcof1O08784 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Tcof1O08784 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tcof1O08784 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tcof1O08784 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tcof1O08784 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tcof1O08784 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tcof1O08784 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tcof1O08784 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.19■□□□□ 0.66
Tcof1O08784 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.19■□□□□ 0.66
Tcof1O08784 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Tcof1O08784 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.19■□□□□ 0.66
Tcof1O08784 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.19■□□□□ 0.66
Tcof1O08784 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tcof1O08784 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tcof1O08784 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tcof1O08784 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tcof1O08784 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tcof1O08784 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Tcof1O08784 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Tcof1O08784 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tcof1O08784 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Tcof1O08784 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tcof1O08784 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tcof1O08784 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tcof1O08784 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tcof1O08784 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.18■□□□□ 0.66
Tcof1O08784 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms