Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
B020004C17RikJ3QP07 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
B020004C17RikJ3QP07 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
B020004C17RikJ3QP07 Gm14822-201ENSMUST00000122247 291 ntBASIC18.34■□□□□ 0.53
B020004C17RikJ3QP07 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.34■□□□□ 0.53
B020004C17RikJ3QP07 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
B020004C17RikJ3QP07 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.34■□□□□ 0.53
B020004C17RikJ3QP07 Mir8117-201ENSMUST00000184773 107 ntBASIC18.34■□□□□ 0.53
B020004C17RikJ3QP07 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
B020004C17RikJ3QP07 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
B020004C17RikJ3QP07 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
B020004C17RikJ3QP07 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
B020004C17RikJ3QP07 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
B020004C17RikJ3QP07 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
B020004C17RikJ3QP07 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
B020004C17RikJ3QP07 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
B020004C17RikJ3QP07 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.33■□□□□ 0.53
B020004C17RikJ3QP07 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
B020004C17RikJ3QP07 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
B020004C17RikJ3QP07 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
B020004C17RikJ3QP07 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
B020004C17RikJ3QP07 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.33■□□□□ 0.52
B020004C17RikJ3QP07 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
B020004C17RikJ3QP07 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.33■□□□□ 0.52
B020004C17RikJ3QP07 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
B020004C17RikJ3QP07 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
B020004C17RikJ3QP07 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
B020004C17RikJ3QP07 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.33■□□□□ 0.52
B020004C17RikJ3QP07 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
B020004C17RikJ3QP07 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
B020004C17RikJ3QP07 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
B020004C17RikJ3QP07 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.32■□□□□ 0.52
B020004C17RikJ3QP07 Gm25911-201ENSMUST00000157621 56 ntBASIC18.32■□□□□ 0.52
B020004C17RikJ3QP07 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.32■□□□□ 0.52
B020004C17RikJ3QP07 Gm18622-201ENSMUST00000219361 595 ntBASIC18.32■□□□□ 0.52
B020004C17RikJ3QP07 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.32■□□□□ 0.52
B020004C17RikJ3QP07 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
B020004C17RikJ3QP07 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
B020004C17RikJ3QP07 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
B020004C17RikJ3QP07 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
B020004C17RikJ3QP07 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
B020004C17RikJ3QP07 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
B020004C17RikJ3QP07 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.32■□□□□ 0.52
B020004C17RikJ3QP07 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.32■□□□□ 0.52
B020004C17RikJ3QP07 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
B020004C17RikJ3QP07 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Mir3113-201ENSMUST00000175478 76 ntBASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
B020004C17RikJ3QP07 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004C17RikJ3QP07 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004C17RikJ3QP07 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004C17RikJ3QP07 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004C17RikJ3QP07 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
B020004C17RikJ3QP07 Gm27646-201ENSMUST00000183989 110 ntBASIC18.29■□□□□ 0.52
B020004C17RikJ3QP07 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.29■□□□□ 0.52
B020004C17RikJ3QP07 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004C17RikJ3QP07 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004C17RikJ3QP07 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
B020004C17RikJ3QP07 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004C17RikJ3QP07 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004C17RikJ3QP07 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004C17RikJ3QP07 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
B020004C17RikJ3QP07 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms