Protein–RNA interactions for Protein: J3QNG1

Gm6408, Predicted gene 6408, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6408J3QNG1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm6408J3QNG1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Gm6408J3QNG1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm6408J3QNG1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm6408J3QNG1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm6408J3QNG1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm6408J3QNG1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.45■□□□□ 0.22
Gm6408J3QNG1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm6408J3QNG1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm6408J3QNG1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Gm6408J3QNG1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Gm13186-201ENSMUST00000118031 316 ntBASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm6408J3QNG1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Phf7-203ENSMUST00000226565 1971 ntBASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Actl10-202ENSMUST00000226583 1501 ntBASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.43■□□□□ 0.22
Gm6408J3QNG1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Gm7370-201ENSMUST00000219471 767 ntBASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm6408J3QNG1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm6408J3QNG1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Gm6408J3QNG1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Gm6408J3QNG1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm6408J3QNG1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm6408J3QNG1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm6408J3QNG1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Gm6408J3QNG1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Gm6408J3QNG1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm6408J3QNG1 Gm11539-201ENSMUST00000119837 557 ntBASIC16.41■□□□□ 0.22
Gm6408J3QNG1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.41■□□□□ 0.22
Gm6408J3QNG1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.41■□□□□ 0.22
Gm6408J3QNG1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.41■□□□□ 0.22
Gm6408J3QNG1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm6408J3QNG1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.41■□□□□ 0.22
Gm6408J3QNG1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm6408J3QNG1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms