Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11236J3QMS7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Gm11236J3QMS7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.17■□□□□ 0.34
Gm11236J3QMS7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.17■□□□□ 0.34
Gm11236J3QMS7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11236J3QMS7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11236J3QMS7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Gm11236J3QMS7 Gm5867-201ENSMUST00000063197 592 ntBASIC17.17■□□□□ 0.34
Gm11236J3QMS7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11236J3QMS7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Gm11236J3QMS7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11236J3QMS7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11236J3QMS7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11236J3QMS7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11236J3QMS7 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11236J3QMS7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.15■□□□□ 0.34
Gm11236J3QMS7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gm11236J3QMS7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm11236J3QMS7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11236J3QMS7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11236J3QMS7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11236J3QMS7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm11236J3QMS7 Gm8097-201ENSMUST00000117903 829 ntBASIC17.14■□□□□ 0.33
Gm11236J3QMS7 Gm11780-201ENSMUST00000136880 516 ntBASIC17.14■□□□□ 0.33
Gm11236J3QMS7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11236J3QMS7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.14■□□□□ 0.33
Gm11236J3QMS7 Mir6404-201ENSMUST00000183699 94 ntBASIC17.14■□□□□ 0.33
Gm11236J3QMS7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
Gm11236J3QMS7 Gm6089-201ENSMUST00000197666 938 ntBASIC17.14■□□□□ 0.33
Gm11236J3QMS7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
Gm11236J3QMS7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11236J3QMS7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11236J3QMS7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11236J3QMS7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11236J3QMS7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11236J3QMS7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11236J3QMS7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms